Detailed information    

insolico Bioinformatically predicted

Overview


Name   degQ   Type   Regulator
Locus tag   NYE49_RS16185 Genome accession   NZ_CP151962
Coordinates   3129823..3129963 (-) Length   46 a.a.
NCBI ID   WP_003220708.1    Uniprot ID   G4P060
Organism   Bacillus sp. FSL L8-0358     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 3124823..3134963
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE49_RS16160 (NYE49_16160) - 3125167..3125547 (-) 381 WP_174616601.1 hotdog fold thioesterase -
  NYE49_RS16165 (NYE49_16165) comA 3125564..3126208 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  NYE49_RS16170 (NYE49_16170) comP 3126289..3128589 (-) 2301 WP_063334593.1 histidine kinase Regulator
  NYE49_RS16175 (NYE49_16175) comX 3128601..3128765 (-) 165 WP_326148241.1 competence pheromone ComX -
  NYE49_RS16180 (NYE49_16180) - 3128778..3129638 (-) 861 WP_015483633.1 polyprenyl synthetase family protein -
  NYE49_RS16185 (NYE49_16185) degQ 3129823..3129963 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  NYE49_RS16190 (NYE49_16190) - 3130185..3130310 (+) 126 WP_154796978.1 hypothetical protein -
  NYE49_RS16195 (NYE49_16195) - 3130424..3130792 (+) 369 WP_015483634.1 hypothetical protein -
  NYE49_RS16200 (NYE49_16200) pdeH 3130768..3131997 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  NYE49_RS16205 (NYE49_16205) - 3132134..3133606 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  NYE49_RS16210 (NYE49_16210) - 3133622..3134173 (-) 552 WP_014477836.1 isochorismatase family cysteine hydrolase -
  NYE49_RS16215 (NYE49_16215) - 3134270..3134668 (-) 399 WP_342410445.1 YueI family protein -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5546.44 Da        Isoelectric Point: 6.2559

>NTDB_id=982361 NYE49_RS16185 WP_003220708.1 3129823..3129963(-) (degQ) [Bacillus sp. FSL L8-0358]
MEKKLEEVKQLLFRLELDIKETTDSLRNINKSIDQLDKYNYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=982361 NYE49_RS16185 WP_003220708.1 3129823..3129963(-) (degQ) [Bacillus sp. FSL L8-0358]
ATGGAAAAGAAACTTGAAGAAGTAAAACAATTGTTATTCCGACTCGAACTTGATATTAAAGAAACGACAGATTCATTACG
AAACATTAACAAAAGCATTGATCAACTCGATAAATACAATTATGCAATGAAAATTTCGTGA

Domains


Predicted by InterproScan.

(1-46)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4P060

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment