Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   NYE49_RS16170 Genome accession   NZ_CP151962
Coordinates   3126289..3128589 (-) Length   766 a.a.
NCBI ID   WP_063334593.1    Uniprot ID   -
Organism   Bacillus sp. FSL L8-0358     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3121289..3133589
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE49_RS16130 (NYE49_16130) - 3121758..3122189 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  NYE49_RS16135 (NYE49_16135) - 3122189..3122530 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  NYE49_RS16140 (NYE49_16140) - 3122523..3124004 (+) 1482 WP_174616586.1 Na+/H+ antiporter subunit D -
  NYE49_RS16145 (NYE49_16145) - 3124010..3124486 (+) 477 WP_174616587.1 Na+/H+ antiporter subunit E -
  NYE49_RS16150 (NYE49_16150) - 3124486..3124770 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  NYE49_RS16155 (NYE49_16155) mnhG 3124754..3125128 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  NYE49_RS16160 (NYE49_16160) - 3125167..3125547 (-) 381 WP_174616601.1 hotdog fold thioesterase -
  NYE49_RS16165 (NYE49_16165) comA 3125564..3126208 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  NYE49_RS16170 (NYE49_16170) comP 3126289..3128589 (-) 2301 WP_063334593.1 histidine kinase Regulator
  NYE49_RS16175 (NYE49_16175) comX 3128601..3128765 (-) 165 WP_326148241.1 competence pheromone ComX -
  NYE49_RS16180 (NYE49_16180) - 3128778..3129638 (-) 861 WP_015483633.1 polyprenyl synthetase family protein -
  NYE49_RS16185 (NYE49_16185) degQ 3129823..3129963 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  NYE49_RS16190 (NYE49_16190) - 3130185..3130310 (+) 126 WP_154796978.1 hypothetical protein -
  NYE49_RS16195 (NYE49_16195) - 3130424..3130792 (+) 369 WP_015483634.1 hypothetical protein -
  NYE49_RS16200 (NYE49_16200) pdeH 3130768..3131997 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88513.67 Da        Isoelectric Point: 7.8708

>NTDB_id=982360 NYE49_RS16170 WP_063334593.1 3126289..3128589(-) (comP) [Bacillus sp. FSL L8-0358]
MKAWYNKVSIFLILVSLVYVTYLTYISSSKLLVGAAVAENQDNEVVITNIEEFSTAYYSGIQKGDVIKSINNHKVKRPLE
VQKYNSNHVSSIVVERDGEKVKIKPDLMNDGNFTTFVIPLIFYIACLFCCFFILKINESKKLLSALILIIFLLSASLAYL
SAGGSAKGDWLSRCIMVFTLTSVMFNYLLFLYQYFKELGTVLFNKKVFILYAIPVLNLVFELLRTQLFFRHYVPKINLLS
FFISFIIVSVYFGSILIKSKDTEQAHIIKVLTIINILSFSPFLFLYIIPYVFLSTDGISSFVAASFMFLIPFSLVYQFMT
NKIYNVDFILSRLKYYGILALTPTIILVTVFELIGNPAGDFYYFRLAILMYIIMVAVFYYKEVLDFKFRLKRVSEKFNYQ
DSIYKFTQLIRDSTSLIQVFEELKTTILEVSLVSRAHIYEVSVDGSIKLYEELNQNSFEKVYQKEFRKVTSEIGKIVEFN
KGFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTI
EEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGL
VKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGF
DQDKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=982360 NYE49_RS16170 WP_063334593.1 3126289..3128589(-) (comP) [Bacillus sp. FSL L8-0358]
ATGAAGGCATGGTACAACAAAGTTTCAATTTTTTTGATTTTAGTTAGTTTAGTCTATGTAACTTATTTAACATATATAAG
TTCGAGTAAACTTTTAGTTGGTGCAGCAGTAGCCGAAAATCAAGACAATGAAGTTGTAATAACAAATATTGAGGAATTTT
CTACGGCTTATTACTCAGGCATACAAAAAGGGGACGTCATCAAAAGTATTAATAATCATAAAGTTAAGCGTCCTCTTGAA
GTTCAAAAATATAATTCAAACCATGTGAGTTCAATAGTCGTCGAGAGAGATGGAGAAAAGGTTAAAATTAAGCCTGATTT
AATGAATGATGGGAATTTTACTACTTTTGTGATCCCATTAATATTTTATATAGCCTGTCTATTTTGTTGTTTCTTCATTC
TAAAAATAAATGAATCGAAAAAACTACTCTCTGCTTTGATTTTAATCATTTTCTTGTTATCTGCTTCTTTAGCATACTTA
AGTGCGGGTGGATCTGCAAAGGGAGATTGGTTAAGCAGATGTATAATGGTATTCACTTTAACATCTGTAATGTTTAACTA
TCTTCTTTTCTTGTATCAGTATTTTAAAGAACTTGGCACTGTGTTATTTAACAAAAAAGTTTTTATATTATATGCAATTC
CAGTACTAAATCTAGTTTTTGAATTGTTGCGAACTCAACTTTTCTTTAGACATTATGTGCCTAAAATAAATTTACTTTCG
TTCTTTATTTCATTTATAATCGTGAGCGTATATTTTGGATCTATTTTAATTAAAAGTAAGGATACTGAACAAGCACATAT
TATAAAAGTTCTTACCATAATTAATATCTTATCTTTTTCGCCGTTTTTGTTTTTATATATAATACCTTATGTATTCTTAA
GCACTGATGGGATTTCTTCTTTTGTAGCTGCTTCATTTATGTTCCTAATACCATTCTCTTTGGTTTATCAATTTATGACA
AATAAAATTTATAATGTGGATTTTATTTTGAGCAGGTTAAAATATTATGGAATATTAGCATTAACGCCCACAATTATTTT
AGTTACGGTATTCGAGTTAATAGGAAATCCAGCTGGAGATTTCTATTATTTCAGACTGGCGATTCTTATGTATATTATTA
TGGTGGCGGTCTTTTATTATAAGGAAGTACTTGATTTCAAATTTAGATTAAAAAGAGTTTCGGAAAAATTTAATTATCAA
GACAGTATATATAAATTTACGCAGCTGATTAGAGATTCAACTTCTTTGATCCAAGTATTTGAGGAACTGAAAACTACAAT
ACTTGAGGTTTCGCTTGTAAGCCGAGCCCATATTTATGAGGTTTCAGTTGATGGAAGTATTAAACTCTATGAAGAACTTA
ATCAAAATTCATTTGAAAAAGTCTATCAAAAAGAATTTAGAAAAGTAACATCCGAAATAGGGAAAATCGTTGAATTTAAT
AAAGGTTTTGTCATGAAAATAGGTGAACGCGGTGGTAAATCATTTGTGATCCTTTGTTTATCTAAAATGAATACGCCTCG
TCTCACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATTG
AAGAACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTATACGATC
GAGGAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAAACGCCAGTG
TGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTACAGATGAATG
AGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGATTG
GTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACTGGGAGATTTAC
GGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTTAAGCACTCTC
AGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGCGTAGGGTTT
GATCAAGATAAAAATACTGAGCATTCTATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCG
CCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

57.781

100

0.591


Multiple sequence alignment