Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NYE49_RS12395 | Genome accession | NZ_CP151962 |
| Coordinates | 2426369..2427439 (-) | Length | 356 a.a. |
| NCBI ID | WP_015483431.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL L8-0358 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2421369..2432439
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYE49_RS12350 (NYE49_12350) | tapA | 2421849..2422610 (-) | 762 | WP_047182870.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NYE49_RS12355 (NYE49_12355) | - | 2422880..2423206 (+) | 327 | WP_047183570.1 | YqzG/YhdC family protein | - |
| NYE49_RS12360 (NYE49_12360) | - | 2423248..2423427 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| NYE49_RS12365 (NYE49_12365) | comGG | 2423499..2423873 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| NYE49_RS12370 (NYE49_12370) | comGF | 2423874..2424257 (-) | 384 | WP_015384087.1 | ComG operon protein ComGF | Machinery gene |
| NYE49_RS12375 (NYE49_12375) | comGE | 2424283..2424630 (-) | 348 | WP_047182872.1 | ComG operon protein 5 | Machinery gene |
| NYE49_RS12380 (NYE49_12380) | comGD | 2424614..2425045 (-) | 432 | WP_015384089.1 | comG operon protein ComGD | Machinery gene |
| NYE49_RS12385 (NYE49_12385) | comGC | 2425035..2425331 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| NYE49_RS12390 (NYE49_12390) | comGB | 2425345..2426382 (-) | 1038 | WP_047182873.1 | comG operon protein ComGB | Machinery gene |
| NYE49_RS12395 (NYE49_12395) | comGA | 2426369..2427439 (-) | 1071 | WP_015483431.1 | competence protein ComGA | Machinery gene |
| NYE49_RS12400 (NYE49_12400) | corA | 2427849..2428802 (-) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| NYE49_RS12405 (NYE49_12405) | - | 2428945..2430273 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| NYE49_RS12410 (NYE49_12410) | rsbRD | 2430326..2431162 (-) | 837 | WP_015384093.1 | RsbT co-antagonist protein RsbRD | - |
| NYE49_RS12420 (NYE49_12420) | mgsR | 2431386..2431766 (-) | 381 | WP_003230147.1 | transcriptional regulator MgsR | - |
| NYE49_RS12425 (NYE49_12425) | - | 2431998..2432243 (+) | 246 | WP_003226300.1 | DUF2626 domain-containing protein | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40458.64 Da Isoelectric Point: 9.0175
>NTDB_id=982344 NYE49_RS12395 WP_015483431.1 2426369..2427439(-) (comGA) [Bacillus sp. FSL L8-0358]
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYITTNNYDRWVYHEKD
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYITTNNYDRWVYHEKD
Nucleotide
Download Length: 1071 bp
>NTDB_id=982344 NYE49_RS12395 WP_015483431.1 2426369..2427439(-) (comGA) [Bacillus sp. FSL L8-0358]
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGTGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGGCTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCATTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGATCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTGACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTAGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGCCAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTTTACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATATAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGTGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGGCTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCATTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGATCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTGACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTAGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGCCAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTTTACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATATAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
99.719 |
100 |
0.997 |
| pilF | Thermus thermophilus HB27 |
36.827 |
99.157 |
0.365 |