Detailed information NTG0981077

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACM425_RS22645
• Genome accession: NZ_CP182408
• Coordinates: 4632960..4633985 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain C11
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4627960..4638985

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM425_RS22635 (ACM425_22635)	rpmE	4630191..4630403 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACM425_RS22640 (ACM425_22640)	priA	4630606..4632804 (+)	2199	WP_001298972.1	primosomal protein N'	Machinery gene
ACM425_RS22645 (ACM425_22645)	cytR	4632960..4633985 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACM425_RS22650 (ACM425_22650)	ftsN	4634077..4635036 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACM425_RS22655 (ACM425_22655)	hslV	4635129..4635659 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACM425_RS22660 (ACM425_22660)	hslU	4635669..4637000 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
ACM425_RS22665 (ACM425_22665)	menA	4637067..4637993 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACM425_RS22670 (ACM425_22670)	rraA	4638086..4638571 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACM425_RS22675 (ACM425_22675)	zapB	4638656..4638901 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=981077 ACM425_RS22645 WP_000644904.1 4632960..4633985(+) (cytR) [Escherichia coli strain C11]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=981077 ACM425_RS22645 WP_000644904.1 4632960..4633985(+) (cytR) [Escherichia coli strain C11]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628