Detailed information NTG0980931

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: AAFF32_RS07825
• Genome accession: NZ_CP151802
• Coordinates: 1700295..1701758 (-)
• Length: 487 a.a.
• NCBI ID: WP_216960187.1
• Uniprot ID: A0AAP2H907
• Organism: Lysobacter sp. FW306-1B-D06B
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1695295..1706758

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAFF32_RS07815 (AAFF32_07815)	-	1696330..1699371 (-)	3042	WP_342316997.1	fused MFS/spermidine synthase	-
AAFF32_RS07820 (AAFF32_07820)	-	1699473..1699886 (-)	414	WP_342316998.1	pilin	-
AAFF32_RS07825 (AAFF32_07825)	pilR	1700295..1701758 (-)	1464	WP_216960187.1	sigma-54 dependent transcriptional regulator	Regulator
AAFF32_RS07830 (AAFF32_07830)	-	1701843..1703468 (-)	1626	WP_254200192.1	ATP-binding protein	-
AAFF32_RS07835 (AAFF32_07835)	sucC	1703686..1704852 (+)	1167	WP_342317000.1	ADP-forming succinate--CoA ligase subunit beta	-
AAFF32_RS07840 (AAFF32_07840)	sucD	1704865..1705740 (+)	876	WP_216960179.1	succinate--CoA ligase subunit alpha	-

Sequence

Protein

• Length: 487 a.a.
• Molecular weight: 52109.79 Da
• Isoelectric Point: 6.7662

>NTDB_id=980931 AAFF32_RS07825 WP_216960187.1 1700295..1701758(-) (pilR) [Lysobacter sp. FW306-1B-D06B]
MAETRSALVVDDERDIRELLVMTLGRMGLRCDTASTIGEARGQLARNRYDLCLTDMRLPDGSGMDLVAEISQKHPETPVA
MITAFGNVEAAVEALKAGAFDFVAKPVDLAVLRDLVRHALDLNERRKTAPPADAVAARLYGQSPAMATLRGTIGKVARSQ
APVYIVGESGVGKELVARTIHAEGARSTGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADKPGLFQSADGGTLFLDEI
AELPLAMQVKLLRAIQEKSIRPVGANAEVPVDVRILSATHKDLGALVADGRFRQDLYYRINVIELRVPPLRERQDDLAGL
AEKVLLRLATAQGRIFPPTLSPDALEALRAYAFPGNVRELENILERALALAEGDSLTAEDLRLPKPAGASASAPMAAASA
APAPASSAAASQPSLMVPGQPAQAIDPRTLNPRDTASSPLPSYIEEIERAAIQQALQENRYNKTRTAAALGITFRALRYK
LKKLGID

Nucleotide

• Length: 1464 bp

>NTDB_id=980931 AAFF32_RS07825 WP_216960187.1 1700295..1701758(-) (pilR) [Lysobacter sp. FW306-1B-D06B]
ATGGCCGAAACACGTAGTGCATTGGTGGTCGACGACGAACGCGATATCCGCGAACTGCTCGTCATGACCTTGGGCCGCAT
GGGCCTGCGATGCGACACCGCCTCCACGATTGGCGAAGCCCGCGGCCAGCTCGCGCGCAATCGCTATGACCTGTGCCTGA
CCGACATGCGCCTGCCGGACGGCTCGGGCATGGACCTGGTCGCCGAGATCAGCCAGAAGCATCCGGAAACCCCGGTCGCG
ATGATCACCGCCTTCGGCAACGTCGAAGCCGCGGTGGAAGCGCTGAAGGCCGGCGCGTTCGATTTCGTCGCCAAGCCCGT
CGACCTGGCCGTGTTGCGCGACCTCGTCCGCCACGCCCTGGACCTCAACGAACGCCGCAAGACCGCGCCGCCGGCCGATG
CCGTGGCTGCGCGCCTGTACGGCCAGTCGCCGGCGATGGCGACCCTGCGCGGGACGATCGGCAAGGTCGCGCGCAGCCAG
GCCCCGGTGTACATCGTCGGCGAGTCGGGCGTGGGCAAGGAGCTCGTCGCCCGCACGATTCATGCAGAAGGCGCGCGCTC
CACGGGCCCGTTCGTGCCGGTCAACTGCGGCGCGATCCCGGCCGAGCTGATGGAGAGCGAGTTCTTCGGCCACAAGAAGG
GCAGCTTCACCGGCGCCCACGCGGACAAGCCCGGCCTGTTCCAGAGCGCCGATGGCGGCACGTTGTTCCTGGACGAGATC
GCCGAGCTGCCGCTGGCGATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAATCGATCCGCCCCGTCGGCGCCAACGC
CGAAGTGCCGGTGGACGTGCGCATCCTGTCGGCCACGCACAAGGACCTGGGCGCGCTGGTCGCCGATGGCCGCTTCCGCC
AGGACCTTTACTACCGAATCAACGTGATCGAACTGCGCGTGCCGCCGCTGCGCGAACGCCAGGACGACCTCGCGGGCCTG
GCCGAGAAGGTGCTGCTGCGCCTTGCGACCGCGCAGGGACGCATCTTCCCGCCGACGCTCAGCCCCGATGCACTGGAAGC
GCTGCGAGCGTATGCCTTCCCGGGCAATGTCCGCGAGCTGGAGAACATCCTGGAGCGCGCGCTCGCGCTGGCCGAAGGCG
ACAGCCTGACCGCCGAGGACTTGCGCCTGCCCAAGCCCGCCGGCGCCTCCGCGTCCGCGCCCATGGCCGCTGCCTCTGCG
GCGCCCGCACCCGCATCGAGCGCCGCGGCCTCGCAGCCGTCGCTGATGGTGCCCGGCCAGCCCGCGCAGGCGATCGACCC
GCGCACGCTCAATCCGCGCGACACCGCCAGCAGTCCCCTGCCCTCGTACATCGAGGAGATCGAACGCGCCGCGATCCAGC
AGGCGCTGCAGGAGAACCGCTACAACAAGACGCGCACCGCGGCCGCGCTGGGCATCACCTTCCGCGCGCTGCGCTACAAG
CTCAAGAAGCTGGGCATCGATTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (140-305)

• Response regulator receiver domain (Response_reg) (8-116)

• Bacterial regulatory protein, Fis family (HTH_8) (444-484)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	59.213	99.179	0.587
pilR	Acinetobacter baumannii strain A118	47.951	100	0.48