Detailed information
Bioinformatically predicted
Overview
| Name | vraR | Type | Regulator |
| Locus tag | ABXG87_RS02830 | Genome accession | NZ_AP031488 |
| Coordinates | 558397..559041 (+) | Length | 214 a.a. |
| NCBI ID | WP_002891417.1 | Uniprot ID | J7TMS3 |
| Organism | Streptococcus salivarius strain NBRC 13956 | ||
| Function | repress expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 553397..564041
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABXG87_RS02810 (Ssa13956_04960) | stkP/pknB | 553755..555635 (+) | 1881 | WP_353551820.1 | Stk1 family PASTA domain-containing Ser/Thr kinase | Regulator |
| ABXG87_RS02815 (Ssa13956_04970) | - | 555781..556539 (+) | 759 | WP_353551822.1 | ion channel | - |
| ABXG87_RS02820 (Ssa13956_04980) | liaF | 556702..557400 (+) | 699 | WP_353551824.1 | cell wall-active antibiotics response protein LiaF | - |
| ABXG87_RS02825 (Ssa13956_04990) | - | 557397..558407 (+) | 1011 | WP_002891418.1 | sensor histidine kinase | - |
| ABXG87_RS02830 (Ssa13956_05000) | vraR | 558397..559041 (+) | 645 | WP_002891417.1 | response regulator transcription factor | Regulator |
| ABXG87_RS02845 (Ssa13956_05010) | rimM | 559736..560254 (+) | 519 | WP_353551826.1 | ribosome maturation factor RimM | - |
| ABXG87_RS02850 (Ssa13956_05020) | trmD | 560244..560963 (+) | 720 | WP_060972852.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ABXG87_RS02855 (Ssa13956_05030) | - | 560965..561963 (+) | 999 | WP_061652289.1 | NAD(P)/FAD-dependent oxidoreductase | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 24007.33 Da Isoelectric Point: 4.5814
>NTDB_id=98081 ABXG87_RS02830 WP_002891417.1 558397..559041(+) (vraR) [Streptococcus salivarius strain NBRC 13956]
MSNKINVILVDDHEMVRLGLKSFLNLQGDVEVVGEASNGREGVDLALELRPDVVVMDLVMPELDGVQATLELLKEWPEAK
ILVLTSYLDNEKIYPVIEAGAKGYMLKTSSAAEILNSIRKVYRGEEAIETEVDNKIKYHDSHPDLHDDLTARERDILALL
AKGYDNQTIANELFISLKTVKTHVSNILGKLNVDDRTQAVVYAFRHHLVSQDDE
MSNKINVILVDDHEMVRLGLKSFLNLQGDVEVVGEASNGREGVDLALELRPDVVVMDLVMPELDGVQATLELLKEWPEAK
ILVLTSYLDNEKIYPVIEAGAKGYMLKTSSAAEILNSIRKVYRGEEAIETEVDNKIKYHDSHPDLHDDLTARERDILALL
AKGYDNQTIANELFISLKTVKTHVSNILGKLNVDDRTQAVVYAFRHHLVSQDDE
Nucleotide
Download Length: 645 bp
>NTDB_id=98081 ABXG87_RS02830 WP_002891417.1 558397..559041(+) (vraR) [Streptococcus salivarius strain NBRC 13956]
ATGTCGAATAAGATAAATGTGATTTTGGTCGATGACCATGAGATGGTCCGTTTGGGACTTAAGAGTTTCCTGAATCTCCA
AGGAGATGTCGAAGTGGTTGGAGAAGCGAGCAATGGCCGAGAAGGTGTTGACCTTGCCCTGGAACTTCGTCCAGATGTCG
TCGTAATGGACCTTGTCATGCCTGAATTAGATGGTGTTCAAGCGACTTTGGAATTGCTCAAAGAATGGCCAGAAGCCAAG
ATTTTGGTTTTGACTAGCTATTTGGACAATGAAAAAATTTATCCAGTCATTGAAGCTGGTGCTAAAGGTTATATGCTTAA
AACTAGCAGTGCGGCAGAGATTCTCAATAGTATTCGTAAGGTTTACCGTGGTGAAGAAGCTATCGAAACAGAGGTGGACA
ATAAGATTAAATACCATGATAGCCATCCGGACCTACACGATGACTTAACGGCACGTGAACGTGATATCCTGGCACTTTTG
GCTAAGGGGTATGACAATCAGACCATTGCTAATGAGCTATTTATTTCATTGAAAACCGTTAAAACCCACGTCTCTAATAT
CCTAGGAAAACTCAATGTTGATGACCGTACTCAGGCTGTCGTTTATGCCTTTAGACATCATTTGGTTTCACAGGATGATG
AATAA
ATGTCGAATAAGATAAATGTGATTTTGGTCGATGACCATGAGATGGTCCGTTTGGGACTTAAGAGTTTCCTGAATCTCCA
AGGAGATGTCGAAGTGGTTGGAGAAGCGAGCAATGGCCGAGAAGGTGTTGACCTTGCCCTGGAACTTCGTCCAGATGTCG
TCGTAATGGACCTTGTCATGCCTGAATTAGATGGTGTTCAAGCGACTTTGGAATTGCTCAAAGAATGGCCAGAAGCCAAG
ATTTTGGTTTTGACTAGCTATTTGGACAATGAAAAAATTTATCCAGTCATTGAAGCTGGTGCTAAAGGTTATATGCTTAA
AACTAGCAGTGCGGCAGAGATTCTCAATAGTATTCGTAAGGTTTACCGTGGTGAAGAAGCTATCGAAACAGAGGTGGACA
ATAAGATTAAATACCATGATAGCCATCCGGACCTACACGATGACTTAACGGCACGTGAACGTGATATCCTGGCACTTTTG
GCTAAGGGGTATGACAATCAGACCATTGCTAATGAGCTATTTATTTCATTGAAAACCGTTAAAACCCACGTCTCTAATAT
CCTAGGAAAACTCAATGTTGATGACCGTACTCAGGCTGTCGTTTATGCCTTTAGACATCATTTGGTTTCACAGGATGATG
AATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| vraR | Staphylococcus aureus N315 |
50.485 |
96.262 |
0.486 |
| degU | Bacillus subtilis subsp. subtilis str. 168 |
36.161 |
100 |
0.379 |