Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | AAFA18_RS01380 | Genome accession | NZ_CP151702 |
| Coordinates | 286169..286651 (+) | Length | 160 a.a. |
| NCBI ID | WP_001046423.1 | Uniprot ID | A0A9E9MD39 |
| Organism | Acinetobacter baumannii strain F19-10-4 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 281169..291651
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFA18_RS01370 (AAFA18_01370) | pilX | 281472..282290 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| AAFA18_RS01375 (AAFA18_01375) | pilY1 | 282302..286156 (+) | 3855 | WP_000768954.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| AAFA18_RS01380 (AAFA18_01380) | pilY2 | 286169..286651 (+) | 483 | WP_001046423.1 | type IV pilin protein | Machinery gene |
| AAFA18_RS01385 (AAFA18_01385) | pilE | 286648..287073 (+) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| AAFA18_RS01390 (AAFA18_01390) | rpsP | 287220..287471 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AAFA18_RS01395 (AAFA18_01395) | rimM | 287491..288039 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AAFA18_RS01400 (AAFA18_01400) | trmD | 288085..288825 (+) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AAFA18_RS01405 (AAFA18_01405) | rplS | 289033..289401 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AAFA18_RS01410 (AAFA18_01410) | - | 289454..290395 (-) | 942 | WP_085943974.1 | triacylglycerol lipase | - |
| AAFA18_RS01415 (AAFA18_01415) | - | 290510..291541 (-) | 1032 | Protein_269 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17575.84 Da Isoelectric Point: 8.4834
>NTDB_id=980212 AAFA18_RS01380 WP_001046423.1 286169..286651(+) (pilY2) [Acinetobacter baumannii strain F19-10-4]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAVKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSAANGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAVKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSAANGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=980212 AAFA18_RS01380 WP_001046423.1 286169..286651(+) (pilY2) [Acinetobacter baumannii strain F19-10-4]
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGTTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTGCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGAACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGTTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTGCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGAACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
93.125 |
100 |
0.931 |
| comE | Acinetobacter baylyi ADP1 |
38.953 |
100 |
0.419 |