Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | AAFA12_RS01695 | Genome accession | NZ_CP151696 |
| Coordinates | 351426..351908 (+) | Length | 160 a.a. |
| NCBI ID | WP_001046423.1 | Uniprot ID | A0A9E9MD39 |
| Organism | Acinetobacter baumannii strain F19-10-MH12 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 346426..356908
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFA12_RS01685 (AAFA12_01685) | pilX | 346729..347547 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| AAFA12_RS01690 (AAFA12_01690) | pilY1 | 347559..351413 (+) | 3855 | WP_000768954.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| AAFA12_RS01695 (AAFA12_01695) | pilY2 | 351426..351908 (+) | 483 | WP_001046423.1 | type IV pilin protein | Machinery gene |
| AAFA12_RS01700 (AAFA12_01700) | pilE | 351905..352330 (+) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| AAFA12_RS01705 (AAFA12_01705) | rpsP | 352477..352728 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AAFA12_RS01710 (AAFA12_01710) | rimM | 352748..353296 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AAFA12_RS01715 (AAFA12_01715) | trmD | 353342..354082 (+) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AAFA12_RS01720 (AAFA12_01720) | rplS | 354290..354658 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AAFA12_RS01725 (AAFA12_01725) | - | 354711..355652 (-) | 942 | WP_085943974.1 | triacylglycerol lipase | - |
| AAFA12_RS01730 (AAFA12_01730) | - | 355767..356798 (-) | 1032 | Protein_332 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17575.84 Da Isoelectric Point: 8.4834
>NTDB_id=980027 AAFA12_RS01695 WP_001046423.1 351426..351908(+) (pilY2) [Acinetobacter baumannii strain F19-10-MH12]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAVKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSAANGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAVKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSAANGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=980027 AAFA12_RS01695 WP_001046423.1 351426..351908(+) (pilY2) [Acinetobacter baumannii strain F19-10-MH12]
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGTTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTGCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGAACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGTTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTGCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGAACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
93.125 |
100 |
0.931 |
| comE | Acinetobacter baylyi ADP1 |
38.953 |
100 |
0.419 |