Detailed information NTG0980026

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACM2XU_RS24410
• Genome accession: NZ_CP182182
• Coordinates: 4953456..4954481 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain EC19
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4948456..4959481

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACM2XU_RS24400 (ACM2XU_24400)	rpmE	4950687..4950899 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACM2XU_RS24405 (ACM2XU_24405)	priA	4951102..4953300 (+)	2199	WP_022646377.1	primosomal protein N'	Machinery gene
ACM2XU_RS24410 (ACM2XU_24410)	cytR	4953456..4954481 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACM2XU_RS24415 (ACM2XU_24415)	ftsN	4954573..4955532 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACM2XU_RS24420 (ACM2XU_24420)	hslV	4955625..4956155 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACM2XU_RS24425 (ACM2XU_24425)	hslU	4956165..4957496 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACM2XU_RS24430 (ACM2XU_24430)	menA	4957563..4958489 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACM2XU_RS24435 (ACM2XU_24435)	rraA	4958582..4959067 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACM2XU_RS24440 (ACM2XU_24440)	zapB	4959152..4959397 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=980026 ACM2XU_RS24410 WP_000644904.1 4953456..4954481(+) (cytR) [Escherichia coli strain EC19]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=980026 ACM2XU_RS24410 WP_000644904.1 4953456..4954481(+) (cytR) [Escherichia coli strain EC19]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628