Detailed information NTG0979952

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: AAFA20_RS16815
• Genome accession: NZ_CP151692
• Coordinates: 3526618..3527100 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046423.1
• Uniprot ID: A0A9E9MD39
• Organism: Acinetobacter baumannii strain F19-10-CH6
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3521618..3532100

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAFA20_RS16780 (AAFA20_16780)	-	3521728..3522759 (+)	1032	Protein_3279	lipase secretion chaperone	-
AAFA20_RS16785 (AAFA20_16785)	-	3522874..3523815 (+)	942	WP_085943974.1	triacylglycerol lipase	-
AAFA20_RS16790 (AAFA20_16790)	rplS	3523868..3524236 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
AAFA20_RS16795 (AAFA20_16795)	trmD	3524444..3525184 (-)	741	WP_000464599.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
AAFA20_RS16800 (AAFA20_16800)	rimM	3525230..3525778 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
AAFA20_RS16805 (AAFA20_16805)	rpsP	3525798..3526049 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
AAFA20_RS16810 (AAFA20_16810)	pilE	3526196..3526621 (-)	426	WP_000788337.1	type IV pilin protein	Machinery gene
AAFA20_RS16815 (AAFA20_16815)	pilY2	3526618..3527100 (-)	483	WP_001046423.1	type IV pilin protein	Machinery gene
AAFA20_RS16820 (AAFA20_16820)	pilY1	3527113..3530967 (-)	3855	WP_000768954.1	PilC/PilY family type IV pilus protein	Machinery gene
AAFA20_RS16825 (AAFA20_16825)	pilX	3530979..3531797 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17575.84 Da
• Isoelectric Point: 8.4834

>NTDB_id=979952 AAFA20_RS16815 WP_001046423.1 3526618..3527100(-) (pilY2) [Acinetobacter baumannii strain F19-10-CH6]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAVKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSAANGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ

Nucleotide

• Length: 483 bp

>NTDB_id=979952 AAFA20_RS16815 WP_001046423.1 3526618..3527100(-) (pilY2) [Acinetobacter baumannii strain F19-10-CH6]
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGTTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTGCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGAACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-127)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	93.125	100	0.931
comE	Acinetobacter baylyi ADP1	38.953	100	0.419