Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AAFA20_RS16810 | Genome accession | NZ_CP151692 |
| Coordinates | 3526196..3526621 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788337.1 | Uniprot ID | A0A009SG52 |
| Organism | Acinetobacter baumannii strain F19-10-CH6 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3521196..3531621
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAFA20_RS16780 (AAFA20_16780) | - | 3521728..3522759 (+) | 1032 | Protein_3279 | lipase secretion chaperone | - |
| AAFA20_RS16785 (AAFA20_16785) | - | 3522874..3523815 (+) | 942 | WP_085943974.1 | triacylglycerol lipase | - |
| AAFA20_RS16790 (AAFA20_16790) | rplS | 3523868..3524236 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AAFA20_RS16795 (AAFA20_16795) | trmD | 3524444..3525184 (-) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AAFA20_RS16800 (AAFA20_16800) | rimM | 3525230..3525778 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AAFA20_RS16805 (AAFA20_16805) | rpsP | 3525798..3526049 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AAFA20_RS16810 (AAFA20_16810) | pilE | 3526196..3526621 (-) | 426 | WP_000788337.1 | type IV pilin protein | Machinery gene |
| AAFA20_RS16815 (AAFA20_16815) | pilY2 | 3526618..3527100 (-) | 483 | WP_001046423.1 | type IV pilin protein | Machinery gene |
| AAFA20_RS16820 (AAFA20_16820) | pilY1 | 3527113..3530967 (-) | 3855 | WP_000768954.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15163.36 Da Isoelectric Point: 7.8144
>NTDB_id=979951 AAFA20_RS16810 WP_000788337.1 3526196..3526621(-) (pilE) [Acinetobacter baumannii strain F19-10-CH6]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=979951 AAFA20_RS16810 WP_000788337.1 3526196..3526621(-) (pilE) [Acinetobacter baumannii strain F19-10-CH6]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACATTAGAATCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCATTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.78 |
100 |
0.908 |
| comF | Acinetobacter baylyi ADP1 |
50 |
99.291 |
0.496 |