Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AADZ70_RS16895 Genome accession   NZ_CP151679
Coordinates   3358570..3359523 (+) Length   317 a.a.
NCBI ID   WP_016937258.1    Uniprot ID   -
Organism   Bacillus sp. YBsi01     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3353570..3364523
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AADZ70_RS16870 (AADZ70_16870) - 3353615..3355048 (+) 1434 WP_197083934.1 HAMP domain-containing sensor histidine kinase -
  AADZ70_RS16875 (AADZ70_16875) rapC 3355202..3356350 (+) 1149 WP_045926250.1 tetratricopeptide repeat protein Regulator
  AADZ70_RS16880 (AADZ70_16880) phrC 3356334..3356453 (+) 120 WP_016937261.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  AADZ70_RS16885 (AADZ70_16885) - 3356597..3356695 (-) 99 WP_016937260.1 YjcZ family sporulation protein -
  AADZ70_RS16890 (AADZ70_16890) - 3356791..3358155 (-) 1365 WP_064778211.1 aspartate kinase -
  AADZ70_RS16895 (AADZ70_16895) ceuB 3358570..3359523 (+) 954 WP_016937258.1 ABC transporter permease Machinery gene
  AADZ70_RS16900 (AADZ70_16900) - 3359513..3360460 (+) 948 WP_016937257.1 iron chelate uptake ABC transporter family permease subunit -
  AADZ70_RS16905 (AADZ70_16905) - 3360454..3361212 (+) 759 WP_016937256.1 ABC transporter ATP-binding protein -
  AADZ70_RS16910 (AADZ70_16910) - 3361234..3362178 (+) 945 WP_016937255.1 siderophore ABC transporter substrate-binding protein -
  AADZ70_RS16915 (AADZ70_16915) - 3362220..3363644 (-) 1425 WP_342007356.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34957.23 Da        Isoelectric Point: 9.6741

>NTDB_id=979725 AADZ70_RS16895 WP_016937258.1 3358570..3359523(+) (ceuB) [Bacillus sp. YBsi01]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQASTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFIFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSVATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNIVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=979725 AADZ70_RS16895 WP_016937258.1 3358570..3359523(+) (ceuB) [Bacillus sp. YBsi01]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTATTGGCGTGTACTTCTATTTTTATCGGTGTAGAAGACTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAAGTACATTATTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TTGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGAAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGGATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTTATTTTCGCATTGGCGGGAAATTTCCTGTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATCGTCAGTTCAGTCGCCACGTTTATCGCGTATAAATACGATCTGATC
CAAAACCTGTCGTCCTGGCTGCAGGGGGATTTCTCATTGGTCGTCAAAGGCCGGTACGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTCTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCGTCACTTGTGATTCTGACCGTCGGGATG
CTGCCGTTTCTCGGTCTGATCATTCCCAATATCGTGTCGATCTACAAAGGGGACAACCTGAGGAGCAGTCTGCCCCACAC
AGCTCTCCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCTTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGCTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.165

99.685

0.53

Multiple sequence alignment