Detailed information NTG0979723

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AADZ70_RS16875
• Genome accession: NZ_CP151679
• Coordinates: 3355202..3356350 (+)
• Length: 382 a.a.
• NCBI ID: WP_045926250.1
• Uniprot ID: -
• Organism: Bacillus sp. YBsi01
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3350202..3361350

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AADZ70_RS16855 (AADZ70_16855)	-	3350598..3351281 (-)	684	WP_064778214.1	ABC transporter ATP-binding protein	-
AADZ70_RS16860 (AADZ70_16860)	-	3351296..3352732 (-)	1437	WP_045926252.1	ABC transporter permease	-
AADZ70_RS16865 (AADZ70_16865)	-	3352945..3353628 (+)	684	WP_016937264.1	response regulator transcription factor	-
AADZ70_RS16870 (AADZ70_16870)	-	3353615..3355048 (+)	1434	WP_197083934.1	HAMP domain-containing sensor histidine kinase	-
AADZ70_RS16875 (AADZ70_16875)	rapC	3355202..3356350 (+)	1149	WP_045926250.1	tetratricopeptide repeat protein	Regulator
AADZ70_RS16880 (AADZ70_16880)	phrC	3356334..3356453 (+)	120	WP_016937261.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
AADZ70_RS16885 (AADZ70_16885)	-	3356597..3356695 (-)	99	WP_016937260.1	YjcZ family sporulation protein	-
AADZ70_RS16890 (AADZ70_16890)	-	3356791..3358155 (-)	1365	WP_064778211.1	aspartate kinase	-
AADZ70_RS16895 (AADZ70_16895)	ceuB	3358570..3359523 (+)	954	WP_016937258.1	ABC transporter permease	Machinery gene
AADZ70_RS16900 (AADZ70_16900)	-	3359513..3360460 (+)	948	WP_016937257.1	iron chelate uptake ABC transporter family permease subunit	-
AADZ70_RS16905 (AADZ70_16905)	-	3360454..3361212 (+)	759	WP_016937256.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45561.76 Da
• Isoelectric Point: 5.0674

>NTDB_id=979723 AADZ70_RS16875 WP_045926250.1 3355202..3356350(+) (rapC) [Bacillus sp. YBsi01]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRTD
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKDKASEYHRRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLENKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=979723 AADZ70_RS16875 WP_045926250.1 3355202..3356350(+) (rapC) [Bacillus sp. YBsi01]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAGATTAACGAGTGGTATCGATACATAAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTGGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATATCAGCAATTACGTATTATAAACAGGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAGCGGGCAGAGTTTTATTTTAAGGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAGAATGCTTATGAAATTTACGTAGAGCAGGACACATACAACGTCCGGATCATTCAATGCCATTT
TGTGTTCGGCGTCAATTTAATGGATGAAAGACGTTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCTG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCACCGAC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGATAAAGCGTCGGAATATCACAGGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAGAATAAAAATTTGTACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.984	100	0.83
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571