Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | AADZ70_RS07550 | Genome accession | NZ_CP151679 |
| Coordinates | 1539056..1540093 (-) | Length | 345 a.a. |
| NCBI ID | WP_342007948.1 | Uniprot ID | - |
| Organism | Bacillus sp. YBsi01 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1534056..1545093
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AADZ70_RS07500 (AADZ70_07500) | - | 1534291..1535076 (-) | 786 | WP_047475632.1 | TasA family protein | - |
| AADZ70_RS07505 (AADZ70_07505) | - | 1535140..1535724 (-) | 585 | WP_016938975.1 | signal peptidase I | - |
| AADZ70_RS07510 (AADZ70_07510) | tapA | 1535696..1536367 (-) | 672 | WP_029575370.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AADZ70_RS07515 (AADZ70_07515) | - | 1536626..1536955 (+) | 330 | WP_016938972.1 | DUF3889 domain-containing protein | - |
| AADZ70_RS07520 (AADZ70_07520) | - | 1536995..1537174 (-) | 180 | WP_016938971.1 | YqzE family protein | - |
| AADZ70_RS07525 (AADZ70_07525) | comGG | 1537231..1537608 (-) | 378 | WP_342007946.1 | competence type IV pilus minor pilin ComGG | - |
| AADZ70_RS07530 (AADZ70_07530) | comGF | 1537609..1538106 (-) | 498 | WP_342007947.1 | competence type IV pilus minor pilin ComGF | - |
| AADZ70_RS07535 (AADZ70_07535) | comGE | 1538018..1538332 (-) | 315 | WP_045926718.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| AADZ70_RS07540 (AADZ70_07540) | comGD | 1538316..1538753 (-) | 438 | WP_045926719.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AADZ70_RS07545 (AADZ70_07545) | comGC | 1538743..1539009 (-) | 267 | WP_045926801.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AADZ70_RS07550 (AADZ70_07550) | comGB | 1539056..1540093 (-) | 1038 | WP_342007948.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AADZ70_RS07555 (AADZ70_07555) | comGA | 1540080..1541150 (-) | 1071 | WP_045926720.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AADZ70_RS07560 (AADZ70_07560) | - | 1541343..1542293 (-) | 951 | WP_049627017.1 | magnesium transporter CorA family protein | - |
| AADZ70_RS07565 (AADZ70_07565) | - | 1542441..1543742 (+) | 1302 | WP_188154561.1 | hemolysin family protein | - |
| AADZ70_RS07570 (AADZ70_07570) | - | 1543780..1544610 (-) | 831 | WP_188154562.1 | STAS domain-containing protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39710.10 Da Isoelectric Point: 9.3064
>NTDB_id=979684 AADZ70_RS07550 WP_342007948.1 1539056..1540093(-) (comGB) [Bacillus sp. YBsi01]
MKRIKRTWPLKDQAAFLKRLGEMTEKGYSLIEGLRLLKLQLHKRQLAELTDGIRRLREGDAFYEVLEALSFHKEAVSICY
FAEKHGELPGAMKQSGELLQRKLMQMNQVKKMLRYPMFLICSVCVMFYILQSMIIPQFSGIYQSMNMNTSGCVSFIFSFF
QHFHEACALVLSAALSLFLFVWFLCKKKSPQDKMLIVVKIPLIGKAAVLFNSYFFSLQLSSLLKSGLSIYDSLTAFKEQS
FLPFYREEADMLITRLKAGETIESALSGHPCYEKDLAAAVSHGQANGRLHRELYTYSQFMMERLEQNAEKYTGILQPVIY
GVVAGMILIVYMSMMMPMYQMMNQM
MKRIKRTWPLKDQAAFLKRLGEMTEKGYSLIEGLRLLKLQLHKRQLAELTDGIRRLREGDAFYEVLEALSFHKEAVSICY
FAEKHGELPGAMKQSGELLQRKLMQMNQVKKMLRYPMFLICSVCVMFYILQSMIIPQFSGIYQSMNMNTSGCVSFIFSFF
QHFHEACALVLSAALSLFLFVWFLCKKKSPQDKMLIVVKIPLIGKAAVLFNSYFFSLQLSSLLKSGLSIYDSLTAFKEQS
FLPFYREEADMLITRLKAGETIESALSGHPCYEKDLAAAVSHGQANGRLHRELYTYSQFMMERLEQNAEKYTGILQPVIY
GVVAGMILIVYMSMMMPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=979684 AADZ70_RS07550 WP_342007948.1 1539056..1540093(-) (comGB) [Bacillus sp. YBsi01]
ATGAAGCGGATTAAAAGAACCTGGCCGTTGAAGGATCAAGCGGCTTTTTTGAAAAGGCTCGGTGAAATGACCGAAAAAGG
GTACAGTCTGATCGAAGGGCTCAGACTGCTGAAACTCCAGCTTCATAAACGCCAGCTTGCAGAGCTGACGGACGGAATCC
GCCGGCTTAGGGAAGGCGATGCGTTTTACGAAGTGCTTGAGGCATTGTCTTTTCATAAAGAAGCCGTCTCTATCTGCTAT
TTCGCGGAAAAACACGGAGAATTGCCCGGGGCGATGAAACAAAGCGGCGAATTGTTACAGAGAAAGCTCATGCAGATGAA
TCAAGTCAAAAAAATGCTCCGGTATCCGATGTTTTTAATCTGCTCCGTCTGTGTCATGTTTTATATTCTTCAAAGTATGA
TCATCCCGCAATTTTCAGGGATTTATCAATCAATGAATATGAATACTTCCGGTTGCGTCAGTTTCATTTTTTCATTTTTT
CAGCATTTTCACGAAGCTTGCGCACTGGTGCTGTCAGCCGCTCTCAGCTTGTTTTTGTTCGTTTGGTTTTTATGTAAGAA
AAAATCCCCCCAAGACAAAATGCTTATTGTTGTGAAAATCCCCTTAATAGGAAAAGCAGCCGTTCTTTTTAACAGCTACT
TTTTCTCTTTACAGCTCAGCAGTCTTCTGAAATCCGGTCTTTCTATCTATGACAGCTTAACGGCTTTTAAGGAACAATCT
TTTCTGCCTTTTTATCGTGAAGAAGCGGATATGCTCATTACACGTTTGAAAGCAGGTGAGACAATAGAATCCGCTCTTTC
CGGGCATCCGTGTTATGAAAAAGATCTAGCGGCCGCAGTCAGCCACGGACAGGCAAACGGCAGGCTTCATCGCGAGCTTT
ATACGTACAGTCAGTTTATGATGGAGCGCCTTGAACAAAACGCGGAGAAGTATACAGGCATTCTCCAGCCTGTCATTTAC
GGCGTTGTGGCCGGTATGATTCTGATTGTCTATATGTCAATGATGATGCCGATGTACCAGATGATGAACCAAATGTAA
ATGAAGCGGATTAAAAGAACCTGGCCGTTGAAGGATCAAGCGGCTTTTTTGAAAAGGCTCGGTGAAATGACCGAAAAAGG
GTACAGTCTGATCGAAGGGCTCAGACTGCTGAAACTCCAGCTTCATAAACGCCAGCTTGCAGAGCTGACGGACGGAATCC
GCCGGCTTAGGGAAGGCGATGCGTTTTACGAAGTGCTTGAGGCATTGTCTTTTCATAAAGAAGCCGTCTCTATCTGCTAT
TTCGCGGAAAAACACGGAGAATTGCCCGGGGCGATGAAACAAAGCGGCGAATTGTTACAGAGAAAGCTCATGCAGATGAA
TCAAGTCAAAAAAATGCTCCGGTATCCGATGTTTTTAATCTGCTCCGTCTGTGTCATGTTTTATATTCTTCAAAGTATGA
TCATCCCGCAATTTTCAGGGATTTATCAATCAATGAATATGAATACTTCCGGTTGCGTCAGTTTCATTTTTTCATTTTTT
CAGCATTTTCACGAAGCTTGCGCACTGGTGCTGTCAGCCGCTCTCAGCTTGTTTTTGTTCGTTTGGTTTTTATGTAAGAA
AAAATCCCCCCAAGACAAAATGCTTATTGTTGTGAAAATCCCCTTAATAGGAAAAGCAGCCGTTCTTTTTAACAGCTACT
TTTTCTCTTTACAGCTCAGCAGTCTTCTGAAATCCGGTCTTTCTATCTATGACAGCTTAACGGCTTTTAAGGAACAATCT
TTTCTGCCTTTTTATCGTGAAGAAGCGGATATGCTCATTACACGTTTGAAAGCAGGTGAGACAATAGAATCCGCTCTTTC
CGGGCATCCGTGTTATGAAAAAGATCTAGCGGCCGCAGTCAGCCACGGACAGGCAAACGGCAGGCTTCATCGCGAGCTTT
ATACGTACAGTCAGTTTATGATGGAGCGCCTTGAACAAAACGCGGAGAAGTATACAGGCATTCTCCAGCCTGTCATTTAC
GGCGTTGTGGCCGGTATGATTCTGATTGTCTATATGTCAATGATGATGCCGATGTACCAGATGATGAACCAAATGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
64.706 |
93.623 |
0.606 |