Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG/mmsA   Type   Machinery gene
Locus tag   ACGHT2_RS09265 Genome accession   NZ_AP031455
Coordinates   1769566..1771581 (-) Length   671 a.a.
NCBI ID   WP_117575401.1    Uniprot ID   -
Organism   Streptococcus pasteurianus strain k46-0107-A9     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1764566..1776581
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHT2_RS09235 (K460107A9_17330) - 1764998..1765450 (+) 453 WP_270619589.1 universal stress protein -
  ACGHT2_RS09240 (K460107A9_17340) - 1765527..1766930 (-) 1404 WP_003066280.1 HAD-IIB family hydrolase -
  ACGHT2_RS09245 (K460107A9_17350) - 1767001..1767963 (+) 963 WP_003066282.1 asparaginase -
  ACGHT2_RS09250 (K460107A9_17360) - 1768028..1768231 (-) 204 WP_003066286.1 helix-turn-helix transcriptional regulator -
  ACGHT2_RS09255 (K460107A9_17370) - 1768244..1768723 (-) 480 WP_003066288.1 DUF2975 domain-containing protein -
  ACGHT2_RS09260 (K460107A9_17380) - 1768774..1769124 (-) 351 WP_117575399.1 iron ABC transporter -
  ACGHT2_RS09265 (K460107A9_17390) recG/mmsA 1769566..1771581 (-) 2016 WP_117575401.1 ATP-dependent DNA helicase RecG Machinery gene
  ACGHT2_RS09270 (K460107A9_17400) alr 1771668..1772774 (-) 1107 WP_270619588.1 alanine racemase -
  ACGHT2_RS09275 (K460107A9_17410) acpS 1772831..1773190 (-) 360 WP_013852215.1 holo-ACP synthase -
  ACGHT2_RS09280 (K460107A9_17420) - 1773312..1774367 (-) 1056 WP_003066308.1 3-deoxy-7-phosphoheptulonate synthase -
  ACGHT2_RS09285 (K460107A9_17430) - 1774371..1775402 (-) 1032 WP_003066311.1 3-deoxy-7-phosphoheptulonate synthase -

Sequence

Protein


Download         Length: 671 a.a.        Molecular weight: 74666.79 Da        Isoelectric Point: 6.2243

>NTDB_id=97965 ACGHT2_RS09265 WP_117575401.1 1769566..1771581(-) (recG/mmsA) [Streptococcus pasteurianus strain k46-0107-A9]
MNLQSSIVELKGIGAKSAEKFYKLDIYTIEDLLLYYPFRYEDFKSKRVSELADGEKAVITGTVVTPANVQYYGYKRNRLS
FKIKQGEAVIAISFFNQPYLADKVEIGSDIAIFGKWDALKSAVTGMKILAQVEDDMQPVYRVAQGISQNALVKAIKAAFE
IGAQNWLPENLPQVLLDKYRLLGRAQATAAMHFPKDLAEYKQALRRIKFEELFYFQMNLQVLKADNKSEANGLAIAYDEQ
KVADKIAALPFTLTGGQRRSLDDILADMRSGGHMNRLLQGDVGSGKTVVASLAMYATYTAGFQSALMVPTEILAEQHFES
LTQLFPALSIAILTSGMKTAAKQVALSAIADGSVDMIVGTHALIQDAVTYHRLGLVITDEQHRFGVNQRRVFREKGENPD
VLMMTATPIPRTLAITAFGEMDVSIIDELPAGRKPIITRWVKHEQLEVVLDWVKKELQKGAQAYVISPLIEESESLDLKN
AVALHEELSAYFADSATVALMHGRMKNDEKEAIMQDFKAQKSQVLVSTTVIEVGVNVPNATIMIIMDADRFGLSQLHQLR
GRVGRGDKQSYAILVANPKTQTGKERMKIMTETTDGFVLAEADLKMRGSGEIFGTRQSGIPEFQVADIVEDYNILEEARR
VASQIVSEKDWQNNPQWQIVSQNLKDKGTFD

Nucleotide


Download         Length: 2016 bp        

>NTDB_id=97965 ACGHT2_RS09265 WP_117575401.1 1769566..1771581(-) (recG/mmsA) [Streptococcus pasteurianus strain k46-0107-A9]
ATGAATTTACAATCATCAATTGTGGAATTAAAAGGAATAGGGGCTAAGTCGGCGGAAAAATTTTATAAGTTAGATATTTA
TACCATTGAAGATTTACTGCTGTACTATCCTTTTCGATATGAAGATTTTAAGAGCAAGCGTGTTTCAGAGCTTGCTGATG
GGGAAAAAGCTGTCATTACGGGAACGGTTGTGACACCTGCAAATGTGCAATATTATGGTTATAAGCGTAATCGTTTGTCG
TTTAAAATCAAGCAGGGCGAAGCGGTTATTGCGATTTCTTTTTTTAACCAGCCTTATTTAGCTGATAAAGTCGAGATTGG
CAGCGATATCGCGATTTTTGGAAAATGGGATGCCCTAAAATCAGCGGTGACTGGTATGAAAATTTTAGCGCAAGTTGAAG
ATGATATGCAGCCAGTTTACCGTGTTGCTCAAGGTATTTCACAAAATGCACTGGTCAAAGCTATCAAAGCAGCTTTTGAA
ATTGGTGCTCAGAATTGGTTGCCTGAAAATTTACCGCAGGTGCTTTTGGACAAGTATCGTTTGTTAGGGCGTGCTCAAGC
AACGGCTGCTATGCACTTTCCGAAAGATTTAGCAGAGTATAAACAAGCACTTCGTCGGATAAAATTTGAAGAACTGTTCT
ATTTCCAAATGAATTTGCAAGTTTTAAAGGCAGATAATAAATCAGAAGCTAATGGTTTGGCGATTGCTTATGATGAGCAA
AAAGTTGCTGATAAGATTGCAGCTCTGCCATTTACCTTGACGGGTGGGCAAAGGCGGAGTCTTGATGATATTTTGGCGGA
TATGCGTTCTGGTGGTCATATGAATCGTCTCTTGCAAGGGGACGTTGGTTCTGGTAAGACGGTTGTGGCTAGTCTTGCCA
TGTATGCTACTTATACGGCAGGTTTTCAATCAGCTTTGATGGTGCCAACGGAAATTTTGGCGGAGCAGCATTTTGAAAGT
TTGACCCAGCTTTTTCCAGCTTTGTCCATTGCAATTTTAACGTCAGGGATGAAAACAGCAGCCAAACAAGTGGCACTTTC
GGCGATTGCGGATGGTTCGGTAGATATGATTGTTGGTACGCATGCGCTGATTCAAGATGCGGTAACTTACCACCGCTTGG
GGCTTGTCATTACTGATGAACAACACCGTTTTGGTGTCAATCAACGTCGTGTTTTCCGTGAAAAGGGCGAAAATCCAGAT
GTGCTCATGATGACTGCAACACCAATTCCACGGACACTTGCTATTACGGCATTTGGTGAAATGGACGTTTCGATTATTGA
TGAATTGCCTGCAGGACGCAAACCGATTATCACGCGTTGGGTTAAACATGAACAGTTGGAAGTTGTGCTTGATTGGGTCA
AAAAAGAATTGCAAAAAGGGGCACAAGCCTATGTGATTTCACCTTTAATTGAAGAATCTGAATCACTTGATTTGAAAAAT
GCTGTTGCCTTGCACGAGGAATTGTCAGCCTATTTTGCGGATAGTGCAACCGTAGCGCTCATGCATGGTCGCATGAAAAA
TGACGAAAAAGAAGCTATCATGCAAGATTTCAAGGCACAAAAAAGTCAGGTTTTGGTATCGACAACCGTCATTGAAGTTG
GTGTTAATGTCCCAAATGCGACCATTATGATTATTATGGATGCTGACCGATTTGGGCTTAGCCAGTTGCATCAGCTTCGT
GGACGAGTTGGGCGTGGAGATAAACAATCTTATGCTATTTTAGTCGCCAATCCCAAAACACAAACAGGAAAAGAGCGCAT
GAAAATCATGACAGAAACAACGGATGGTTTTGTTTTAGCAGAAGCCGACCTTAAAATGCGTGGTTCAGGTGAGATTTTCG
GCACACGCCAATCAGGAATTCCAGAATTCCAAGTGGCAGATATTGTCGAAGATTACAATATTCTCGAGGAAGCTAGACGC
GTTGCAAGTCAGATTGTTTCCGAAAAAGATTGGCAAAACAATCCACAATGGCAAATTGTTAGCCAAAATCTCAAAGACAA
AGGAACTTTCGATTAA

Domains

Predicted by InterProScan.

RecG wedge domain (RecG_wedge)

(10-157)

Helicase conserved C-terminal domain (Helicase_C)

(450-566)

DEAD/DEAH box helicase (DEAD)

(257-409)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(593-666)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG/mmsA Streptococcus pneumoniae R6

70.492

100

0.705
  recG/mmsA Streptococcus pneumoniae R36A

70.492

100

0.705
  recG Bacillus subtilis subsp. subtilis str. 168

49.183

100

0.493
  recG Neisseria meningitidis strain C311

39.098

99.106

0.387

Multiple sequence alignment