Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   AADC60_RS07650 Genome accession   NZ_CP151651
Coordinates   1454413..1455372 (+) Length   319 a.a.
NCBI ID   WP_019381479.1    Uniprot ID   A0A160M8J1
Organism   Cytobacillus pseudoceanisediminis strain GXU-Z9     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1449413..1460372
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AADC60_RS07630 (AADC60_07630) clpB 1449570..1452167 (+) 2598 WP_251174408.1 ATP-dependent chaperone ClpB -
  AADC60_RS07635 (AADC60_07635) - 1452237..1452428 (-) 192 WP_009331232.1 DUF2929 family protein -
  AADC60_RS07640 (AADC60_07640) - 1452643..1453380 (+) 738 WP_019381477.1 alpha/beta hydrolase -
  AADC60_RS07645 (AADC60_07645) - 1453462..1454295 (+) 834 WP_071157531.1 hypothetical protein -
  AADC60_RS07650 (AADC60_07650) med 1454413..1455372 (+) 960 WP_019381479.1 BMP family ABC transporter substrate-binding protein Regulator
  AADC60_RS07655 (AADC60_07655) comZ 1455399..1455593 (+) 195 WP_009331228.1 ComZ family protein Regulator
  AADC60_RS07660 (AADC60_07660) - 1456547..1457509 (+) 963 WP_009331227.1 nuclease-related domain-containing protein -
  AADC60_RS07665 (AADC60_07665) - 1457520..1457903 (-) 384 WP_251263753.1 hypothetical protein -
  AADC60_RS07670 (AADC60_07670) - 1458119..1459051 (+) 933 WP_009331225.1 beta-ketoacyl-ACP synthase III -
  AADC60_RS07675 (AADC60_07675) fabF 1459100..1460338 (+) 1239 WP_342026004.1 beta-ketoacyl-ACP synthase II -

Sequence

Protein


Download         Length: 319 a.a.        Molecular weight: 35607.27 Da        Isoelectric Point: 4.4921

>NTDB_id=979548 AADC60_RS07650 WP_019381479.1 1454413..1455372(+) (med) [Cytobacillus pseudoceanisediminis strain GXU-Z9]
MHKTLVKFGILLLCLLLLASCRQSMSTGKLEKAGLLVPDTVNDQVWGTKGYKGMLKIQSHYNVEVYYKEGMNSEMVVERA
VKEFDQKGVNLIFGHGNEYAAYFNNISKKYPDIHFVSFNGDAKNDNTTSLNFEAYAMGFFGGMVAGHMTKTNNIGILAAF
EWQPEVEGFYQGVSEIDEGINVQIQYVGNWDNDNKAIALLDKMIANKTDVVYPAGDGYNVPVIEKLKEEGLYAIGYISDQ
SDLGESVVLTSTVQHVDVLYELVAKKFNEGELESGNLTFDFEDEVISLGKFSPDVDEEFKKELNAAIENYKKTGKLPNE

Nucleotide


Download         Length: 960 bp        

>NTDB_id=979548 AADC60_RS07650 WP_019381479.1 1454413..1455372(+) (med) [Cytobacillus pseudoceanisediminis strain GXU-Z9]
ATGCATAAGACATTAGTGAAATTCGGGATCCTTCTTTTGTGCCTTCTTTTATTGGCCTCCTGCAGACAATCGATGTCTAC
AGGAAAACTTGAAAAAGCTGGATTATTAGTGCCCGATACCGTCAATGATCAGGTATGGGGGACGAAAGGCTATAAAGGCA
TGTTAAAGATTCAATCCCATTATAATGTGGAGGTTTATTATAAAGAGGGCATGAATTCTGAGATGGTTGTTGAAAGAGCT
GTTAAAGAGTTTGATCAAAAAGGTGTAAACCTGATTTTTGGACATGGCAATGAATACGCGGCATACTTTAATAACATTTC
AAAAAAATACCCTGACATTCATTTTGTCAGCTTTAATGGCGATGCCAAAAATGACAACACCACCAGCTTGAATTTTGAAG
CCTATGCAATGGGATTCTTTGGCGGCATGGTTGCTGGCCATATGACGAAAACCAATAACATAGGAATACTCGCAGCTTTT
GAATGGCAGCCGGAGGTAGAAGGTTTTTATCAAGGTGTAAGCGAAATTGATGAAGGTATAAACGTGCAAATCCAATATGT
CGGCAACTGGGACAATGATAATAAAGCCATAGCTCTCTTGGACAAAATGATTGCCAATAAGACAGATGTTGTCTATCCAG
CTGGAGATGGGTATAATGTTCCTGTCATCGAGAAACTAAAAGAGGAAGGGCTCTACGCCATCGGCTATATTTCCGACCAG
TCTGATCTGGGTGAATCAGTCGTCCTGACCAGTACGGTTCAGCATGTCGATGTTTTGTATGAACTAGTGGCAAAAAAATT
CAACGAAGGCGAATTGGAATCAGGAAATCTAACCTTTGATTTCGAGGATGAAGTTATTTCACTTGGGAAATTCAGCCCTG
ACGTCGACGAAGAATTCAAAAAAGAACTAAACGCTGCCATTGAGAATTACAAAAAAACAGGCAAACTGCCCAACGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(31-318)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A160M8J1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

53.035

98.119

0.52

Multiple sequence alignment