Detailed information NTG0979549

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACNHKU_RS00280
• Genome accession: NZ_CP182142
• Coordinates: 42450..43475 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain CUPF09
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 37450..48475

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNHKU_RS00250 (ACNHKU_00250)	zapB	37534..37779 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACNHKU_RS00255 (ACNHKU_00255)	rraA	37864..38349 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACNHKU_RS00260 (ACNHKU_00260)	menA	38442..39368 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACNHKU_RS00265 (ACNHKU_00265)	hslU	39435..40766 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACNHKU_RS00270 (ACNHKU_00270)	hslV	40776..41306 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACNHKU_RS00275 (ACNHKU_00275)	ftsN	41399..42358 (-)	960	WP_000068828.1	cell division protein FtsN	-
ACNHKU_RS00280 (ACNHKU_00280)	cytR	42450..43475 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACNHKU_RS00285 (ACNHKU_00285)	priA	43631..45829 (-)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
ACNHKU_RS00290 (ACNHKU_00290)	rpmE	46032..46244 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ACNHKU_RS00295 (ACNHKU_00295)	-	46299..46922 (-)	624	WP_000720774.1	TIGR02117 family protein	-
ACNHKU_RS00300 (ACNHKU_00300)	yiiX	46929..47537 (-)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
ACNHKU_RS00305 (ACNHKU_00305)	metJ	47721..48038 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=979549 ACNHKU_RS00280 WP_000644904.1 42450..43475(-) (cytR) [Escherichia coli strain CUPF09]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=979549 ACNHKU_RS00280 WP_000644904.1 42450..43475(-) (cytR) [Escherichia coli strain CUPF09]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628