Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   ACGHT2_RS02035 Genome accession   NZ_AP031455
Coordinates   361512..362546 (+) Length   344 a.a.
NCBI ID   WP_003063395.1    Uniprot ID   E0PBR9
Organism   Streptococcus pasteurianus strain k46-0107-A9     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 356512..367546
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHT2_RS02000 (K460107A9_03290) - 356938..357618 (-) 681 WP_001015311.1 IS6-like element IS1216 family transposase -
  ACGHT2_RS02005 (K460107A9_03300) tsaE 357768..358211 (+) 444 WP_003063385.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACGHT2_RS02010 (K460107A9_03310) - 358204..358716 (+) 513 WP_013851480.1 GNAT family N-acetyltransferase -
  ACGHT2_RS02015 (K460107A9_03320) - 358727..359884 (+) 1158 WP_003063388.1 biofilm formation/cell division transcriptional regulator BrpA -
  ACGHT2_RS02020 (K460107A9_03330) - 360003..360305 (-) 303 WP_003063390.1 hypothetical protein -
  ACGHT2_RS02025 (K460107A9_03340) - 360302..360721 (-) 420 WP_003063392.1 HIT family protein -
  ACGHT2_RS02030 (K460107A9_03350) pptA 360785..361510 (+) 726 WP_013851484.1 ABC transporter ATP-binding protein Regulator
  ACGHT2_RS02035 (K460107A9_03360) pptB 361512..362546 (+) 1035 WP_003063395.1 ABC transporter permease Regulator
  ACGHT2_RS02040 (K460107A9_03370) ccrZ 362611..363405 (+) 795 WP_012961430.1 cell cycle regulator CcrZ -
  ACGHT2_RS02045 (K460107A9_03380) trmB 363405..364043 (+) 639 WP_003063401.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACGHT2_RS02055 - 364569..365046 (+) 478 Protein_345 hypothetical protein -
  ACGHT2_RS02060 (K460107A9_03400) rimP 365299..365784 (+) 486 WP_172456429.1 ribosome maturation factor RimP -
  ACGHT2_RS02065 (K460107A9_03410) nusA 365869..367059 (+) 1191 WP_041973838.1 transcription termination factor NusA -
  ACGHT2_RS02070 (K460107A9_03420) rnpM 367079..367375 (+) 297 WP_003063410.1 RNase P modulator RnpM -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 39754.84 Da        Isoelectric Point: 10.5816

>NTDB_id=97903 ACGHT2_RS02035 WP_003063395.1 361512..362546(+) (pptB) [Streptococcus pasteurianus strain k46-0107-A9]
MKEVFQKRRSAFLGQCLKYLRYVFNDHFVLVLVFLTGFLMVQYSQLLRQFPSQTVVIDVILVLVILVLLSLGKIATYLEA
PDKLFYLPKEIEILQWLSQARRRAFVIWTIVQTAILVLLAPIFFKLGFSTVTFGILLLALAVVKWLVMKEKSKVFFSQGK
FSWDAAISYEAKRRQGVLKFFSLFTTVKGISASVKRRSYLDSLLGLVKKTHAKTWSNLYLRAFLRSSDYFALTLRLLALS
LLALIFISNRLVAVGLALVFNYLLLFQLLTLSQHFDYQYLTNLYPISEKQKAANLKTFLKKLSYLLGFLELLLTFSWQAA
GLLILVTVIITEWYLPYKINKMID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=97903 ACGHT2_RS02035 WP_003063395.1 361512..362546(+) (pptB) [Streptococcus pasteurianus strain k46-0107-A9]
ATGAAAGAAGTTTTTCAAAAGCGCCGTAGTGCTTTTTTAGGGCAATGCTTAAAGTATCTTCGTTATGTCTTTAATGACCA
TTTTGTGCTAGTCTTGGTTTTCTTAACAGGTTTTCTGATGGTTCAATACAGCCAGCTGTTACGTCAGTTTCCAAGTCAGA
CAGTCGTTATTGACGTGATTTTGGTCTTGGTTATCCTTGTTTTGCTTAGCCTTGGGAAGATTGCGACTTATTTGGAAGCA
CCTGATAAATTGTTCTATTTGCCAAAAGAAATTGAGATTTTGCAATGGCTATCACAGGCAAGACGTCGTGCTTTTGTGAT
TTGGACAATCGTGCAAACGGCAATTCTTGTTTTATTAGCTCCCATCTTCTTTAAACTAGGTTTTTCAACGGTTACCTTTG
GCATTTTATTGCTTGCTTTAGCGGTTGTGAAATGGCTTGTAATGAAAGAAAAAAGCAAGGTATTCTTTTCTCAAGGAAAA
TTTTCATGGGATGCTGCCATTTCTTATGAAGCAAAACGTCGTCAAGGAGTGCTTAAATTCTTTTCACTTTTCACAACGGT
TAAGGGAATTTCAGCTAGTGTGAAACGTCGTTCGTACTTGGATAGTTTGCTTGGTTTGGTCAAAAAAACACATGCCAAAA
CATGGTCAAATTTATACCTACGTGCGTTTTTACGGAGTTCAGATTATTTTGCTTTAACCTTGCGATTACTCGCATTGAGC
TTGCTTGCGCTTATCTTTATTTCCAATCGCTTGGTAGCAGTTGGCTTGGCTTTGGTCTTTAATTATTTATTACTTTTTCA
ATTATTAACCCTATCCCAACATTTTGATTATCAATATTTGACCAATCTTTATCCAATTTCTGAAAAGCAAAAGGCGGCTA
ATTTAAAGACATTTTTGAAAAAATTATCGTATTTATTGGGCTTTTTGGAGTTGTTATTAACGTTTTCTTGGCAAGCAGCA
GGCTTATTGATTTTGGTAACGGTTATTATTACAGAATGGTATCTTCCTTACAAAATCAATAAGATGATTGACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB E0PBR9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

46.221

100

0.462

  pptB Streptococcus salivarius strain HSISS4

45.64

100

0.456


Multiple sequence alignment