Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACGHT2_RS02030 Genome accession   NZ_AP031455
Coordinates   360785..361510 (+) Length   241 a.a.
NCBI ID   WP_013851484.1    Uniprot ID   F5X4V8
Organism   Streptococcus pasteurianus strain k46-0107-A9     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 355785..366510
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACGHT2_RS02000 (K460107A9_03290) - 356938..357618 (-) 681 WP_001015311.1 IS6-like element IS1216 family transposase -
  ACGHT2_RS02005 (K460107A9_03300) tsaE 357768..358211 (+) 444 WP_003063385.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACGHT2_RS02010 (K460107A9_03310) - 358204..358716 (+) 513 WP_013851480.1 GNAT family N-acetyltransferase -
  ACGHT2_RS02015 (K460107A9_03320) - 358727..359884 (+) 1158 WP_003063388.1 biofilm formation/cell division transcriptional regulator BrpA -
  ACGHT2_RS02020 (K460107A9_03330) - 360003..360305 (-) 303 WP_003063390.1 hypothetical protein -
  ACGHT2_RS02025 (K460107A9_03340) - 360302..360721 (-) 420 WP_003063392.1 HIT family protein -
  ACGHT2_RS02030 (K460107A9_03350) pptA 360785..361510 (+) 726 WP_013851484.1 ABC transporter ATP-binding protein Regulator
  ACGHT2_RS02035 (K460107A9_03360) pptB 361512..362546 (+) 1035 WP_003063395.1 ABC transporter permease Regulator
  ACGHT2_RS02040 (K460107A9_03370) ccrZ 362611..363405 (+) 795 WP_012961430.1 cell cycle regulator CcrZ -
  ACGHT2_RS02045 (K460107A9_03380) trmB 363405..364043 (+) 639 WP_003063401.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  ACGHT2_RS02055 - 364569..365046 (+) 478 Protein_345 hypothetical protein -
  ACGHT2_RS02060 (K460107A9_03400) rimP 365299..365784 (+) 486 WP_172456429.1 ribosome maturation factor RimP -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26764.09 Da        Isoelectric Point: 4.4838

>NTDB_id=97902 ACGHT2_RS02030 WP_013851484.1 360785..361510(+) (pptA) [Streptococcus pasteurianus strain k46-0107-A9]
MLKIENITGGYINIPVLKNISFEVGDGELIGLIGLNGAGKSTTINEIIGLLTPYQGQISIDGLTLAQNQAEYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDLNYDEAMARATELLELFRLSDKLEWFPINFSKGMKQKVMIICAFMVNPSLFIVDEPF
LGLDPLAISDLTELLAQEKAKGKAILMSTHVLDAAEKMCDRFVILHQGKIRATGTLAELREAFGDETATLNDIYMSLTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=97902 ACGHT2_RS02030 WP_013851484.1 360785..361510(+) (pptA) [Streptococcus pasteurianus strain k46-0107-A9]
ATGTTAAAAATTGAAAATATAACAGGGGGATATATTAACATCCCTGTCTTAAAAAATATTTCTTTTGAAGTTGGTGATGG
TGAGCTTATTGGCTTAATTGGTTTGAATGGGGCTGGTAAGTCAACGACAATCAATGAAATTATTGGGCTCTTAACGCCAT
ATCAAGGGCAAATTTCGATTGATGGTTTGACTTTGGCGCAGAATCAGGCAGAATATCGTAAGAAAATTGGATTTATCCCA
GAAACGCCAAGTTTATATGAAGAATTGACTTTACGTGAACATTTAGAAACAGTTGCAATGGCTTATGACCTTAATTATGA
TGAGGCGATGGCGCGTGCGACAGAATTGTTGGAACTTTTCCGTTTATCTGATAAATTAGAGTGGTTTCCGATTAATTTCT
CTAAAGGGATGAAGCAGAAGGTCATGATTATTTGTGCCTTTATGGTTAATCCAAGTTTGTTTATCGTTGATGAGCCCTTT
TTGGGCTTGGACCCATTAGCAATTTCTGATTTGACAGAATTATTGGCGCAAGAAAAGGCAAAAGGAAAAGCGATTTTGAT
GTCAACACACGTTTTGGATGCTGCTGAAAAGATGTGTGACCGTTTTGTGATTTTGCATCAAGGGAAAATTCGTGCAACTG
GTACATTAGCAGAGCTACGTGAAGCATTTGGTGATGAGACAGCAACGCTTAATGATATTTATATGTCATTGACTAAAGAG
GTGTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F5X4V8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

79.079

99.17

0.784
  pptA Streptococcus thermophilus LMD-9

78.661

99.17

0.78

Multiple sequence alignment