Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   ACM6AA_RS08650 Genome accession   NZ_CP181149
Coordinates   1794102..1795091 (-) Length   329 a.a.
NCBI ID   WP_000219066.1    Uniprot ID   P67655
Organism   Staphylococcus aureus strain AG21-0598     
Function   repress the expression of comX (predicted from homology)   
Competence regulation

Genomic Context


Location: 1789102..1800091
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACM6AA_RS08635 (ACM6AA_08635) acsA 1790303..1792009 (-) 1707 WP_154284553.1 acetate--CoA ligase -
  ACM6AA_RS08640 (ACM6AA_08640) - 1792178..1792810 (+) 633 WP_416152347.1 N-acetyltransferase -
  ACM6AA_RS08645 (ACM6AA_08645) - 1792835..1794004 (+) 1170 WP_209206037.1 acetoin utilization protein AcuC -
  ACM6AA_RS08650 (ACM6AA_08650) ccpA 1794102..1795091 (-) 990 WP_000219066.1 catabolite control protein A Regulator
  ACM6AA_RS08655 (ACM6AA_08655) - 1795164..1795277 (-) 114 WP_001788994.1 hypothetical protein -
  ACM6AA_RS08660 (ACM6AA_08660) - 1795613..1796560 (+) 948 WP_416152348.1 IS30 family transposase -
  ACM6AA_RS08665 (ACM6AA_08665) - 1796705..1797796 (-) 1092 WP_000066378.1 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase -
  ACM6AA_RS08670 (ACM6AA_08670) - 1798250..1798354 (-) 105 WP_154284583.1 hypothetical protein -
  ACM6AA_RS08675 (ACM6AA_08675) - 1798489..1799853 (-) 1365 WP_209206038.1 hypothetical protein -

Sequence


Protein


Download         Length: 329 a.a.        Molecular weight: 36060.24 Da        Isoelectric Point: 5.5054

>NTDB_id=978628 ACM6AA_RS08650 WP_000219066.1 1794102..1795091(-) (ccpA) [Staphylococcus aureus strain AG21-0598]
MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRLNYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLAR
GLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNID
FTEAAKEITGELIEKGAKSFALVGGEHSKKAQEDVLEGLTEVLNKNGLQLGDTLNCSGAESYKEGVKAFAKMKGNLPDAI
LCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMRLLTKYMNDEKIEEPNVVLPH
RIEYRGTTK

Nucleotide


Download         Length: 990 bp        

>NTDB_id=978628 ACM6AA_RS08650 WP_000219066.1 1794102..1795091(-) (ccpA) [Staphylococcus aureus strain AG21-0598]
ATGACAGTTACTATATATGATGTAGCAAGAGAAGCGCGTGTCTCTATGGCCACAGTGTCGCGTGTTGTTAATGGGAACCA
AAATGTTAAAGCAGAAACTAAAAATAAAGTTAACGAAGTCATTAAGCGTTTGAATTATCGTCCAAATGCTGTTGCTAGAG
GTTTAGCTAGTAAAAAGACAACAACAGTAGGTGTGATCATTCCAGATATATCTAATATCTATTATTCACAACTTGCTCGT
GGACTTGAAGATATTGCAACAATGTATAAATATCACTCAATTATTTCAAATTCAGATAACGATCCTGAAAAGGAAAAAGA
AATTTTTAATAACTTATTAAGTAAACAAGTTGATGGTATTATTTTCCTTGGTGGTACAATTACTGAAGAAATGAAAGAAT
TGATAAATCAATCATCTGTACCTGTAGTAGTATCAGGAACAAATGGTAAGGATGCACATATAGCATCAGTTAATATTGAT
TTTACTGAAGCTGCGAAAGAAATTACGGGAGAATTAATTGAAAAAGGCGCTAAATCATTTGCTTTAGTAGGTGGAGAACA
TTCTAAAAAAGCTCAAGAAGATGTTTTAGAAGGTTTAACTGAAGTGTTAAATAAAAATGGTCTTCAATTAGGTGATACAT
TGAATTGTTCTGGTGCTGAAAGTTATAAAGAAGGCGTAAAAGCTTTTGCCAAAATGAAAGGTAATCTTCCAGATGCTATA
TTATGTATCAGTGACGAAGAAGCTATTGGTATTATGCATAGTGCAATGGATGCTGGTATTAAAGTTCCAGAGGAATTACA
AATTATTAGTTTCAATAATACACGTTTAGTTGAGATGGTTAGACCACAACTTTCTAGTGTTATTCAACCATTATATGATA
TCGGTGCAGTAGGGATGCGCTTATTAACAAAATATATGAACGATGAAAAGATAGAAGAACCAAATGTAGTTTTACCTCAC
AGAATTGAATACCGAGGAACTACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P67655

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

47.879

100

0.48

  ccpA Streptococcus gordonii str. Challis substr. CH1

47.112

100

0.471

  ccpA Streptococcus pneumoniae D39

46.201

100

0.462


Multiple sequence alignment