Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   R8775_RS09155 Genome accession   NZ_AP026915
Coordinates   1753729..1754349 (-) Length   206 a.a.
NCBI ID   WP_000839908.1    Uniprot ID   A0A0B7M636
Organism   Streptococcus pneumoniae strain PZ900700005     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1748729..1759349
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8775_RS09130 (PC0005_17850) recA 1749107..1750273 (-) 1167 WP_317680923.1 recombinase RecA Machinery gene
  R8775_RS09135 (PC0005_17860) cinA 1750328..1751584 (-) 1257 WP_000642707.1 competence/damage-inducible protein A Machinery gene
  R8775_RS09140 (PC0005_17870) brpA 1751668..1752684 (-) 1017 WP_000239282.1 biofilm formation/cell division transcriptional regulator BrpA -
  R8775_RS09145 (PC0005_17880) - 1752692..1753210 (-) 519 WP_000455537.1 GNAT family N-acetyltransferase -
  R8775_RS09150 (PC0005_17890) tsaE 1753200..1753643 (-) 444 WP_000288232.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  R8775_RS09155 (PC0005_17900) comM 1753729..1754349 (-) 621 WP_000839908.1 hypothetical protein Regulator
  R8775_RS09160 (PC0005_17910) - 1754732..1755190 (-) 459 Protein_1796 transcriptional regulator -
  R8775_RS09165 (PC0005_17920) - 1755383..1756729 (-) 1347 WP_050210214.1 IS1380-like element ISSpn5 family transposase -
  R8775_RS09170 (PC0005_17930) - 1756884..1757303 (-) 420 Protein_1798 helix-turn-helix domain-containing protein -
  R8775_RS09175 (PC0005_17940) - 1757492..1757662 (+) 171 WP_000742180.1 PhrA family quorum-sensing system peptide -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23552.72 Da        Isoelectric Point: 10.1254

>NTDB_id=97588 R8775_RS09155 WP_000839908.1 1753729..1754349(-) (comM) [Streptococcus pneumoniae strain PZ900700005]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKKSVKLFYSMLLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYVRDFLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLIYIGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIVTLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=97588 R8775_RS09155 WP_000839908.1 1753729..1754349(-) (comM) [Streptococcus pneumoniae strain PZ900700005]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCCTATGGAAGGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGCATGGTTTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACCCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGAAGTCGGTGAAGCTTTTTTACAGTATGTTACTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTTTTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTCTTTTTCCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACGTGCGCGATTTTC
TTGCTATGCTAGACAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTTTTCTTAAGAAATCCAATGACCATT
GTCTCACTTCTGATTTATATTGGACTGGGCTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGTTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0B7M636

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

100

100

1
  comM Streptococcus pneumoniae R6

100

100

1
  comM Streptococcus pneumoniae TIGR4

100

100

1
  comM Streptococcus mitis NCTC 12261

38.974

94.66

0.369
  comM Streptococcus mitis SK321

38.974

94.66

0.369

Multiple sequence alignment