Detailed information NTG0975752

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: AADP84_RS05940
• Genome accession: NZ_CP151186
• Coordinates: 1204923..1207124 (+)
• Length: 733 a.a.
• NCBI ID: WP_031787280.1
• Uniprot ID: -
• Organism: Staphylococcus argenteus strain Dubai-25
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1199923..1212124

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AADP84_RS05900 (AADP84_05900)	aroE	1200304..1201110 (+)	807	WP_031787284.1	shikimate dehydrogenase	-
AADP84_RS05905 (AADP84_05905)	yhbY	1201115..1201405 (+)	291	WP_000955238.1	ribosome assembly RNA-binding protein YhbY	-
AADP84_RS05910 (AADP84_05910)	-	1201408..1201977 (+)	570	WP_000725169.1	nicotinate-nucleotide adenylyltransferase	-
AADP84_RS05915 (AADP84_05915)	yqeK	1201967..1202551 (+)	585	WP_031787283.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
AADP84_RS05920 (AADP84_05920)	rsfS	1202552..1202905 (+)	354	WP_001088023.1	ribosome silencing factor	-
AADP84_RS05925 (AADP84_05925)	-	1202908..1203624 (+)	717	WP_031787282.1	class I SAM-dependent methyltransferase	-
AADP84_RS05930 (AADP84_05930)	comEA	1203664..1204365 (+)	702	WP_072324129.1	ComEA family DNA-binding protein	Machinery gene
AADP84_RS05935 (AADP84_05935)	-	1204457..1204918 (+)	462	WP_000439693.1	ComE operon protein 2	-
AADP84_RS05940 (AADP84_05940)	comEC	1204923..1207124 (+)	2202	WP_031787280.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AADP84_RS05945 (AADP84_05945)	holA	1207181..1208155 (+)	975	WP_001282558.1	DNA polymerase III subunit delta	-
AADP84_RS05950 (AADP84_05950)	rpsT	1208205..1208456 (-)	252	WP_001274017.1	30S ribosomal protein S20	-
AADP84_RS05955 (AADP84_05955)	lepA	1208802..1210625 (+)	1824	WP_000356945.1	translation elongation factor 4	-
AADP84_RS05960 (AADP84_05960)	hemW	1210829..1211953 (+)	1125	WP_000216825.1	radical SAM family heme chaperone HemW	-

Sequence

Protein

• Length: 733 a.a.
• Molecular weight: 85048.10 Da
• Isoelectric Point: 10.0237

>NTDB_id=975752 AADP84_RS05940 WP_031787280.1 1204923..1207124(+) (comEC) [Staphylococcus argenteus strain Dubai-25]
MLYVALSMIVGVLWNSSKVLSTFLFILLLFIAYRKNKIVYAPISLFLIIFSSWYLHYSHQAVFNYIDYIERNPQFNERAQ
VIQIQRQDSDTYKGRLSLKNEIYPFFLTDKKNFDLKKIESRNCIVKGQFKVNDNKFVTLKLQNIVVQSCLKSNQSNLIEK
HKQFIMNRIYDSGIKFPDRIMALITGDVKEINEQFKERVKEIGIYHLLAVSGSHIAAIVFLIYQPLKRLNFPLFVIKGIT
IIVLALFAQYTNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFTFIIMFILNPLVVYDIGFQFSFIISFFIMLLFPFLQ
QLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSIILFPLSILFFITSHFIVGLTPLNYFVDLSFNFH
DWLLELFTRIKQSHFSIPKFNDWIFILFIISVYYIFWLLAKRKYRLVTFWTIIIMTLLITYPTNLHHKITMLNVGQGDSI
LYEGGKNQNVLIDTGGKVINDTKQPSFSISKYHILPTLNERGINELEYLILTHPHNDHIGEVEYIISHIKIKHIVIYNKG
YSSKTLLLLSKLSHKYNIKLMDVRQISSFKLGDSSFQFFDSFIPNSRDKNEYSIITMITYQNKKALLMGDASKNNESLLL
KKYNLPEIDILKVGHHGSKTSSSKEFIEVIRPKISLISSGKNNMYHLPNIEVVKRLQGIRSRIYNSQQSGEVTIDLDENL
KVDSNSYGNASGL

Nucleotide

• Length: 2202 bp

>NTDB_id=975752 AADP84_RS05940 WP_031787280.1 1204923..1207124(+) (comEC) [Staphylococcus argenteus strain Dubai-25]
TTGCTGTATGTCGCATTATCAATGATTGTAGGAGTGCTTTGGAATTCTAGCAAAGTGCTCTCTACATTTCTTTTCATTTT
ACTTTTGTTTATTGCTTATCGTAAAAATAAAATAGTTTATGCTCCTATTTCTCTCTTTTTAATCATTTTTTCCTCATGGT
ATTTACATTATTCACATCAAGCAGTATTTAATTATATCGATTATATTGAACGTAATCCTCAGTTTAATGAGCGTGCTCAA
GTAATCCAAATTCAACGTCAAGATAGTGACACATATAAAGGTAGGTTGAGTTTAAAGAATGAAATATATCCTTTCTTTTT
AACAGATAAAAAGAATTTTGATTTAAAGAAAATTGAAAGTCGTAATTGTATTGTTAAAGGACAATTCAAAGTTAATGACA
ATAAGTTTGTAACTCTTAAATTACAAAATATAGTTGTACAAAGCTGTCTAAAATCGAACCAGTCTAATTTAATTGAGAAA
CATAAACAGTTTATAATGAATCGAATTTATGATTCGGGTATTAAGTTTCCAGATCGTATTATGGCATTGATTACTGGTGA
CGTAAAAGAAATTAATGAGCAATTTAAGGAACGTGTTAAAGAGATAGGTATATATCATTTGCTGGCAGTAAGTGGCTCGC
ATATAGCTGCAATTGTATTCTTAATTTACCAACCTTTAAAACGATTAAATTTTCCTTTATTTGTCATTAAAGGAATTACA
ATCATTGTATTAGCTTTGTTTGCTCAATACACAAATTATGCACCTAGTGCTGTAAGAGCTATAATAATGACAACACTAGT
ACTCCTTATTACTAAGCAAATTAAAATAAAGGGTATTCAGCTATTAGCATTTACTTTTATAATTATGTTTATTTTGAATC
CACTAGTTGTTTATGATATTGGATTTCAATTTTCATTCATCATTTCATTTTTTATTATGCTACTTTTTCCTTTTTTACAG
CAATTGTCAAAGTTACAATCATTATTCATAATTACTTTTATTGCACAATTAGCTTCATTTATCGTTGCCATTCCTAACTT
TCATCAACTTCAATGGGTGGGTTTTTTATCTAATTTGATTTTTGTACCGTACTATTCGATTATACTGTTTCCTCTATCAA
TTTTATTCTTTATTACAAGCCATTTTATTGTGGGCTTAACGCCGCTAAATTACTTTGTTGACCTAAGTTTCAATTTTCAT
GATTGGTTACTAGAACTATTCACTCGAATCAAGCAATCACATTTTTCTATTCCTAAGTTTAATGATTGGATATTTATATT
GTTTATAATTTCTGTTTATTACATATTTTGGTTATTGGCTAAACGTAAATATAGATTGGTTACGTTTTGGACTATAATTA
TTATGACATTATTAATAACATATCCAACAAATTTACATCACAAAATTACAATGTTAAATGTGGGGCAGGGAGATAGTATT
TTATATGAAGGCGGGAAGAACCAAAATGTCTTGATTGATACAGGTGGAAAAGTGATTAATGATACTAAACAACCTAGTTT
TTCAATTTCTAAATATCATATTTTACCAACGCTAAATGAAAGAGGGATAAATGAATTAGAGTATTTAATTTTAACACATC
CACACAATGACCATATTGGTGAAGTTGAATATATTATTAGTCATATTAAAATTAAGCATATAGTGATATACAATAAAGGA
TATAGTAGTAAAACATTGTTGTTATTATCAAAATTAAGCCATAAGTATAACATTAAACTTATGGATGTAAGACAAATTAG
TAGTTTTAAACTTGGGGATAGTAGTTTTCAATTTTTTGATAGTTTTATTCCAAATAGCCGAGATAAAAATGAATATTCGA
TTATTACTATGATTACATATCAAAATAAAAAAGCTTTATTAATGGGAGATGCTAGTAAAAATAATGAATCTTTACTATTA
AAGAAATATAATTTGCCAGAGATTGATATTTTAAAAGTAGGACATCATGGAAGTAAGACAAGTAGTTCTAAAGAATTTAT
AGAGGTGATTAGGCCTAAAATAAGTTTGATTTCTTCTGGGAAGAACAATATGTATCATCTTCCTAACATAGAAGTTGTTA
AACGATTGCAAGGTATTCGCAGTCGCATTTACAATAGTCAACAAAGCGGTGAAGTTACAATAGACTTAGATGAAAATTTA
AAAGTTGATTCAAACTCTTATGGAAATGCAAGTGGTTTATAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (183-441)

• Metallo-beta-lactamase superfamily (Lactamase_B) (474-679)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Staphylococcus aureus N315	95.089	100	0.951
comEC	Staphylococcus aureus MW2	94.679	100	0.947