Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   AAC899_RS15210 Genome accession   NZ_CP151168
Coordinates   3229980..3231122 (+) Length   380 a.a.
NCBI ID   WP_317657714.1    Uniprot ID   -
Organism   Acinetobacter soli strain HY24     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 3224980..3236122
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAC899_RS15185 (AAC899_15185) - 3225079..3226284 (+) 1206 WP_317657716.1 oxygenase MpaB family protein -
  AAC899_RS15190 (AAC899_15190) - 3226318..3226623 (-) 306 WP_004941498.1 hypothetical protein -
  AAC899_RS15195 (AAC899_15195) - 3226699..3228720 (-) 2022 WP_317657715.1 TonB-dependent copper receptor -
  AAC899_RS15200 (AAC899_15200) - 3228823..3229254 (-) 432 WP_076033608.1 DUF2946 family protein -
  AAC899_RS15205 (AAC899_15205) def 3229336..3229860 (-) 525 WP_004944209.1 peptide deformylase -
  AAC899_RS15210 (AAC899_15210) tsaP 3229980..3231122 (+) 1143 WP_317657714.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  AAC899_RS15215 (AAC899_15215) dprA 3231144..3232295 (+) 1152 WP_311090847.1 DNA-processing protein DprA Machinery gene
  AAC899_RS15220 (AAC899_15220) - 3232335..3232907 (+) 573 WP_004941519.1 Sua5/YciO/YrdC/YwlC family protein -
  AAC899_RS15225 (AAC899_15225) - 3233410..3234318 (-) 909 WP_048763958.1 outer envelope protein -
  AAC899_RS15230 (AAC899_15230) - 3234627..3235568 (-) 942 WP_004941523.1 LysR substrate-binding domain-containing protein -

Sequence


Protein


Download         Length: 380 a.a.        Molecular weight: 42103.25 Da        Isoelectric Point: 8.2398

>NTDB_id=975599 AAC899_RS15210 WP_317657714.1 3229980..3231122(+) (tsaP) [Acinetobacter soli strain HY24]
MNMVLNGLRTFSHLGLKQYGFALAICGVVGISNAEAATRNHNPPSLKAGAPHVYVVKKGDTLWDISGKFLKKPWRWPEIW
ASNKHVKNPHWIYPGDRLLLCTLNGRPLVGRDMGDGCEGIIRRYTGRTTLPPQVRIEELKNSIPVIPLSQIQQWLERSTL
VSADAIESVPYVVGTTDQRVLAAKGQKIFVRGQGLQNGQRYAIYHEGEPYTALDEHGKKRILAVELIQVASGIAVQSEQE
ITTLELTDTYNAETRRGDLVMPEQDAMLPTFFYPTEGNEMVAGGKIVRVMGSIATAARNSVVTLNRGLNQGAKVGQVLDI
YAQGESVKDPKTHELIKLPNQNIGSLMIFKTFDEFSYAYVLESNLPIKVGAETRPPQDEE

Nucleotide


Download         Length: 1143 bp        

>NTDB_id=975599 AAC899_RS15210 WP_317657714.1 3229980..3231122(+) (tsaP) [Acinetobacter soli strain HY24]
ATGAACATGGTTTTAAACGGCTTACGCACGTTTTCTCATTTGGGGCTTAAACAATACGGTTTCGCGCTGGCCATCTGTGG
TGTAGTGGGCATATCGAATGCCGAAGCTGCAACGCGCAATCACAATCCACCCTCACTCAAGGCAGGTGCACCGCATGTCT
ATGTGGTCAAAAAAGGGGATACGCTTTGGGATATTTCTGGAAAATTTTTAAAAAAACCATGGCGATGGCCAGAGATCTGG
GCCAGTAACAAACATGTGAAGAATCCACACTGGATTTATCCAGGCGACCGATTGCTGCTGTGTACGCTCAATGGTCGACC
GCTCGTTGGACGAGATATGGGGGATGGCTGTGAAGGAATTATTCGTCGTTATACAGGCCGCACCACCTTACCCCCACAAG
TTCGCATTGAAGAATTAAAAAATAGTATTCCCGTCATTCCGCTAAGCCAAATTCAGCAATGGCTGGAGCGCTCGACACTT
GTATCGGCGGACGCTATTGAGTCTGTTCCTTATGTTGTGGGCACCACTGATCAACGTGTACTGGCTGCCAAAGGTCAAAA
AATCTTTGTGCGGGGTCAGGGCCTACAAAATGGTCAGCGTTATGCGATCTATCATGAGGGTGAGCCCTACACCGCCCTAG
ACGAACACGGCAAAAAGCGCATTCTGGCCGTCGAATTGATTCAGGTGGCTTCGGGGATTGCAGTGCAATCTGAACAAGAG
ATCACCACGCTCGAACTCACCGACACCTATAACGCAGAAACACGTCGTGGCGATTTGGTCATGCCAGAGCAAGATGCCAT
GTTACCAACATTCTTTTATCCAACCGAAGGCAATGAAATGGTGGCAGGTGGCAAGATTGTTCGTGTTATGGGCTCTATTG
CCACAGCAGCACGCAATAGTGTCGTGACGCTTAATCGAGGCTTGAATCAAGGTGCCAAAGTAGGACAAGTACTCGATATT
TATGCGCAAGGCGAAAGCGTCAAAGACCCGAAAACGCATGAACTGATCAAACTTCCGAATCAAAATATTGGAAGTTTGAT
GATATTTAAAACCTTTGATGAATTCAGTTACGCTTACGTACTCGAGAGCAACTTACCCATTAAAGTCGGGGCAGAAACTC
GCCCTCCTCAAGATGAAGAATAA

Domains


Predicted by InterproScan.

(54-99)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

67.454

100

0.676


Multiple sequence alignment