Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   AAC899_RS14965 Genome accession   NZ_CP151168
Coordinates   3174674..3176242 (+) Length   522 a.a.
NCBI ID   WP_111812612.1    Uniprot ID   -
Organism   Acinetobacter soli strain HY24     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3169674..3181242
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAC899_RS14945 (AAC899_14945) - 3170176..3171477 (+) 1302 WP_004932270.1 homoserine dehydrogenase -
  AAC899_RS14950 (AAC899_14950) thrC 3171538..3172677 (+) 1140 WP_004944129.1 threonine synthase -
  AAC899_RS14955 (AAC899_14955) pbpG 3172744..3173802 (-) 1059 WP_317657721.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  AAC899_RS14960 (AAC899_14960) - 3174016..3174651 (+) 636 WP_004932261.1 response regulator -
  AAC899_RS14965 (AAC899_14965) pilS 3174674..3176242 (+) 1569 WP_111812612.1 ATP-binding protein Regulator
  AAC899_RS14970 (AAC899_14970) pilR 3176270..3177688 (+) 1419 WP_343316360.1 sigma-54 dependent transcriptional regulator Regulator
  AAC899_RS14975 (AAC899_14975) - 3177690..3178865 (-) 1176 WP_025096177.1 S41 family peptidase -
  AAC899_RS14980 (AAC899_14980) gpmI 3178877..3180424 (-) 1548 WP_317657720.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence

Protein


Download         Length: 522 a.a.        Molecular weight: 58727.07 Da        Isoelectric Point: 6.7782

>NTDB_id=975596 AAC899_RS14965 WP_111812612.1 3174674..3176242(+) (pilS) [Acinetobacter soli strain HY24]
MPAPALSTQLSYTIYRLGAWYGAYRVIIGLSLILIFYTTGQGHSSDYLHPELYVFTLVIYTLLSFMQGGVFKFSTRWIAS
QLTFLFIVDIVVLSLLTYAVGSPSLHLSMLYVVTVFSAAILLQARMSLTVTLLAVIVVIYQQVVLVLFDKDHLSSISNSI
LLAFLFFVVYGIGQIAVRRFQLLENIANHQSDVLNQLQNINRYILDQAKEGYLVLDESYHVVVCNPAASSFLGIQPLFAH
EQLPLVNLQPDLVEVLRSTSLQDGETFNFESQFSTYRLHVRIQRLRVPQQSLILLILQDAQRMNQRVQQLKLAALGQLSA
SIAHEIRNPLAAIAQANELLSDSELHEQQQLQNMIRKQTKRINGIIEDTLGMARNQTTTPITIQLNPFLQSLLHEDLNDV
QQKLELQLPAHDVSIVFDPSQLRQVLVNLIRNALRHNAPDAPAVQIVVQLASTSIWIDIVDFGEGVTKRNLSQLFKPFFS
TEIQGTGLGLYLSQSLCEANHAKLTYVEQDKGACFRIHCPIN

Nucleotide


Download         Length: 1569 bp        

>NTDB_id=975596 AAC899_RS14965 WP_111812612.1 3174674..3176242(+) (pilS) [Acinetobacter soli strain HY24]
ATGCCGGCGCCTGCTCTGTCTACCCAGCTGTCGTATACGATTTATCGTTTAGGCGCTTGGTATGGTGCCTATCGTGTCAT
TATTGGCTTAAGCCTGATTCTGATCTTTTACACCACAGGTCAGGGTCACAGCTCAGACTATTTACATCCCGAACTTTACG
TTTTTACACTGGTGATTTACACCTTGCTCAGCTTTATGCAAGGTGGCGTATTTAAATTCTCTACACGATGGATTGCCTCA
CAGCTCACCTTCCTGTTTATTGTCGACATTGTGGTACTGAGTTTACTCACCTACGCCGTGGGCAGCCCAAGTCTGCACTT
GAGCATGCTGTACGTGGTGACGGTCTTTTCGGCGGCGATTTTGCTGCAAGCACGAATGTCACTGACCGTTACACTTCTCG
CGGTCATTGTGGTGATCTATCAGCAAGTGGTGTTGGTTCTGTTTGACAAAGACCATCTCAGCTCGATCAGCAACAGTATT
TTGCTGGCTTTTTTATTTTTTGTGGTTTACGGAATCGGGCAAATCGCGGTGCGACGTTTTCAGTTACTTGAGAACATTGC
CAATCATCAATCTGACGTACTCAATCAACTCCAAAATATCAATCGTTATATTCTAGATCAGGCCAAAGAGGGCTATCTGG
TACTCGACGAAAGTTATCATGTTGTGGTGTGTAATCCCGCAGCGTCGAGTTTTTTAGGCATACAGCCACTTTTTGCGCAT
GAACAATTGCCATTGGTGAATCTTCAGCCAGACTTAGTTGAAGTGCTCAGATCGACCTCGCTGCAAGATGGTGAAACATT
CAATTTTGAATCACAGTTTTCGACTTATCGTCTTCATGTGCGTATTCAGCGTTTACGGGTTCCGCAACAATCCTTAATCT
TGTTGATCTTGCAAGACGCTCAAAGAATGAATCAACGTGTTCAGCAGTTAAAACTTGCTGCATTGGGGCAACTCTCGGCC
AGTATTGCCCACGAAATTCGCAATCCTTTGGCTGCAATTGCCCAAGCCAATGAATTACTGTCCGATAGTGAACTGCATGA
GCAGCAGCAATTGCAGAACATGATCAGAAAACAAACCAAACGGATCAATGGCATTATTGAAGATACGCTCGGGATGGCGC
GTAATCAGACCACCACCCCAATCACCATCCAGCTCAATCCGTTTTTACAGAGTTTACTGCACGAAGACTTAAATGATGTA
CAGCAGAAATTAGAACTTCAGCTCCCAGCACACGATGTATCGATTGTGTTTGATCCATCTCAACTCCGGCAAGTGCTGGT
CAATCTGATTCGAAATGCACTTCGTCACAATGCACCAGATGCACCCGCAGTACAGATTGTGGTGCAGTTGGCATCGACTT
CGATCTGGATTGATATTGTCGATTTTGGTGAGGGCGTAACAAAACGTAATCTTTCGCAACTGTTTAAACCGTTTTTTAGT
ACCGAAATTCAGGGAACTGGTTTAGGATTGTATTTATCACAGAGTCTTTGCGAGGCGAATCATGCCAAGCTGACCTATGT
TGAACAAGATAAAGGGGCATGCTTTAGAATCCACTGCCCAATAAATTAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(314-377)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(418-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

60.271

98.851

0.596

Multiple sequence alignment