Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   AAC899_RS05640 Genome accession   NZ_CP151168
Coordinates   1226273..1226977 (-) Length   234 a.a.
NCBI ID   WP_004936591.1    Uniprot ID   A0A1P8EI34
Organism   Acinetobacter soli strain HY24     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1221273..1231977
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAC899_RS05620 (AAC899_05620) - 1222373..1223692 (+) 1320 WP_004936582.1 adenylosuccinate synthase -
  AAC899_RS05625 (AAC899_05625) - 1223802..1224113 (+) 312 WP_025094820.1 hypothetical protein -
  AAC899_RS05630 (AAC899_05630) - 1224229..1225008 (+) 780 WP_343316531.1 M48 family metallopeptidase -
  AAC899_RS05635 (AAC899_05635) - 1225062..1226108 (-) 1047 WP_343316532.1 NADP(H)-dependent aldo-keto reductase -
  AAC899_RS05640 (AAC899_05640) crp 1226273..1226977 (-) 705 WP_004936591.1 cAMP-activated global transcriptional regulator CRP Regulator
  AAC899_RS05645 (AAC899_05645) - 1227122..1227544 (+) 423 WP_004936595.1 OsmC family protein -
  AAC899_RS05650 (AAC899_05650) gigD 1227636..1228088 (-) 453 WP_151746204.1 Lrp/AsnC family transcriptional regulator GigD -
  AAC899_RS05655 (AAC899_05655) kynU 1228236..1229486 (+) 1251 WP_151965426.1 kynureninase -
  AAC899_RS05660 (AAC899_05660) - 1229525..1230937 (+) 1413 WP_288363880.1 amino acid permease -
  AAC899_RS05665 (AAC899_05665) - 1230946..1231695 (+) 750 WP_343316533.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 234 a.a.        Molecular weight: 26335.88 Da        Isoelectric Point: 4.7318

>NTDB_id=975579 AAC899_RS05640 WP_004936591.1 1226273..1226977(-) (crp) [Acinetobacter soli strain HY24]
MTSNFSQLSTDALSPGQLPESVKALLKRANINRYPKRTTIVDAGSESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFESNPQRTAEVRTRDVCEIAEISYDNFHELSKQFPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LASQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEAQNYHDDETDDE

Nucleotide


Download         Length: 705 bp        

>NTDB_id=975579 AAC899_RS05640 WP_004936591.1 1226273..1226977(-) (crp) [Acinetobacter soli strain HY24]
ATGACATCAAATTTCTCACAACTTAGTACAGATGCTCTATCACCTGGTCAGTTACCTGAATCAGTCAAAGCACTATTAAA
AAGAGCAAACATCAATCGTTATCCTAAACGTACCACGATCGTTGATGCAGGTTCAGAATCTAAGTCTTTATATTTGATTT
TAAAAGGTTCAGTTTCCATTATTTTACGTGAAGATGACGAGCGTGAAATCGTTGTGGCTTATCTCAATCCAGGCGACTTC
TTTGGCGAGATGGGACTATTCGAATCGAACCCACAACGTACAGCAGAAGTAAGAACGCGTGATGTATGTGAAATTGCTGA
AATCTCTTACGATAATTTTCATGAACTCAGCAAGCAATTTCCAGACTTAAGTTATGCGGTTTTTGCTCAGTTGGTGCGTC
GCCTGAAAAATACCACGCGTAAGGTGACCGATCTTGCGTTTATCGATGTTTCGGGCCGTATTGCACGTTGCCTCATCGAT
CTTGCGAGCCAGCCAGAAGCCATGATTTTACCGAATGGTCGTCAGATTCGAATCACACGCCAGGAAATTGGCCGCATTGT
TGGTTGTTCTCGTGAAATGGTAGGTCGTGTTTTAAAAACGCTTGAAGAGCAAGGCATGATTGAAACCGATGGTAAGGCAA
TCCTGATTTTTGATGCTTCTTTAGAAGCACAAAATTATCACGATGATGAAACTGATGACGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-119)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1P8EI34

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

92.308

100

0.923
  crp Vibrio cholerae strain A1552

48.058

88.034

0.423
  crp Haemophilus influenzae Rd KW20

48.718

83.333

0.406

Multiple sequence alignment