Detailed information    

insolico Bioinformatically predicted

Overview


Name   comEA   Type   Machinery gene
Locus tag   AAC899_RS02605 Genome accession   NZ_CP151168
Coordinates   559786..560172 (+) Length   128 a.a.
NCBI ID   WP_025096093.1    Uniprot ID   A0A0M1I4Q6
Organism   Acinetobacter soli strain HY24     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 554786..565172
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAC899_RS02590 (AAC899_02590) - 555757..558063 (+) 2307 WP_004940517.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -
  AAC899_RS02595 (AAC899_02595) - 558118..558894 (-) 777 WP_048766423.1 SDR family oxidoreductase -
  AAC899_RS02600 (AAC899_02600) mazG 559016..559789 (+) 774 WP_025096092.1 nucleoside triphosphate pyrophosphohydrolase -
  AAC899_RS02605 (AAC899_02605) comEA 559786..560172 (+) 387 WP_025096093.1 ComEA family DNA-binding protein Machinery gene
  AAC899_RS02610 (AAC899_02610) pcnB 560298..561764 (+) 1467 WP_151753379.1 polynucleotide adenylyltransferase PcnB -
  AAC899_RS02615 (AAC899_02615) folK 561761..562246 (+) 486 WP_004945382.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  AAC899_RS02620 (AAC899_02620) panB 562286..563095 (+) 810 WP_343316482.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  AAC899_RS02625 (AAC899_02625) panC 563099..563944 (+) 846 WP_004940498.1 pantoate--beta-alanine ligase -
  AAC899_RS02630 (AAC899_02630) rapZ 563966..564817 (+) 852 WP_048766432.1 RNase adapter RapZ -
  AAC899_RS02635 (AAC899_02635) - 564814..565083 (+) 270 WP_025096094.1 HPr family phosphocarrier protein -

Sequence


Protein


Download         Length: 128 a.a.        Molecular weight: 14535.60 Da        Isoelectric Point: 10.2106

>NTDB_id=975572 AAC899_RS02605 WP_025096093.1 559786..560172(+) (comEA) [Acinetobacter soli strain HY24]
MMIRIFYSALCALLTSLLFSSSLYAQAFDQQYQAWKSQQQAHDARLQSSHSNYYLAKPSLQANTGPKVNINTATAKDLQQ
LHGVGEKKALSIVEYRQQYGRFNSVDDLQKVKGIGPKFIEKNRHRLAI

Nucleotide


Download         Length: 387 bp        

>NTDB_id=975572 AAC899_RS02605 WP_025096093.1 559786..560172(+) (comEA) [Acinetobacter soli strain HY24]
ATGATGATTCGAATTTTTTATAGCGCCTTGTGCGCGCTACTGACCAGTTTACTATTCAGTTCAAGTTTGTATGCTCAGGC
GTTTGACCAGCAATACCAAGCGTGGAAAAGCCAGCAACAGGCACACGACGCACGACTACAGTCATCTCACTCCAATTATT
ATTTAGCCAAACCTTCCTTGCAGGCAAACACAGGCCCTAAAGTGAATATCAATACTGCGACAGCCAAAGACTTGCAGCAG
TTACATGGGGTAGGAGAGAAAAAGGCACTCTCAATTGTAGAGTACCGCCAGCAATACGGACGCTTTAACTCAGTAGATGA
TTTACAGAAAGTGAAAGGTATTGGGCCTAAATTCATTGAAAAAAATCGTCATCGCTTGGCCATTTAA

Domains


Predicted by InterproScan.

(66-126)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0M1I4Q6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baylyi ADP1

69.531

100

0.695

  comEA Acinetobacter baumannii strain A118

45.968

96.875

0.445

  comEA Acinetobacter baumannii D1279779

41.27

98.438

0.406


Multiple sequence alignment