Detailed information
Bioinformatically predicted
Overview
| Name | comL | Type | Machinery gene |
| Locus tag | AAC899_RS01310 | Genome accession | NZ_CP151168 |
| Coordinates | 298692..299216 (+) | Length | 174 a.a. |
| NCBI ID | WP_343316457.1 | Uniprot ID | - |
| Organism | Acinetobacter soli strain HY24 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 293692..304216
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAC899_RS01295 (AAC899_01295) | comM | 296266..297336 (+) | 1071 | WP_004934220.1 | pilus assembly protein PilM | Machinery gene |
| AAC899_RS01300 (AAC899_01300) | comN | 297323..297961 (+) | 639 | WP_048764556.1 | PilN domain-containing protein | Machinery gene |
| AAC899_RS01305 (AAC899_01305) | comO | 297958..298692 (+) | 735 | WP_048764512.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| AAC899_RS01310 (AAC899_01310) | comL | 298692..299216 (+) | 525 | WP_343316457.1 | pilus assembly protein PilP | Machinery gene |
| AAC899_RS01315 (AAC899_01315) | comQ | 299276..301372 (+) | 2097 | WP_171250625.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| AAC899_RS01320 (AAC899_01320) | aroK | 301409..301951 (+) | 543 | WP_004944978.1 | shikimate kinase AroK | - |
| AAC899_RS01325 (AAC899_01325) | aroB | 301975..303063 (+) | 1089 | WP_343316458.1 | 3-dehydroquinate synthase | - |
| AAC899_RS01330 (AAC899_01330) | - | 303073..303921 (+) | 849 | WP_004944984.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 19242.60 Da Isoelectric Point: 9.0323
>NTDB_id=975562 AAC899_RS01310 WP_343316457.1 298692..299216(+) (comL) [Acinetobacter soli strain HY24]
MIRQLLCLSVVVLGLAGCDSRIDNVQQQMAAIRSQPPLPIEPAPVFMPVPPYLYSANQLRNPFLPNSIAAELKVMSGKRV
YPNLSRPKQPLESYALESLNMKGSMRRINGQILALIQTPDGEIERVQIGNYMGLNEGRIVAISPTQIDLMEIVPDGRDGF
IERPRSLVLIGPKP
MIRQLLCLSVVVLGLAGCDSRIDNVQQQMAAIRSQPPLPIEPAPVFMPVPPYLYSANQLRNPFLPNSIAAELKVMSGKRV
YPNLSRPKQPLESYALESLNMKGSMRRINGQILALIQTPDGEIERVQIGNYMGLNEGRIVAISPTQIDLMEIVPDGRDGF
IERPRSLVLIGPKP
Nucleotide
Download Length: 525 bp
>NTDB_id=975562 AAC899_RS01310 WP_343316457.1 298692..299216(+) (comL) [Acinetobacter soli strain HY24]
ATGATACGTCAACTTCTGTGCTTGAGTGTGGTGGTGCTGGGGCTTGCGGGTTGTGATTCACGCATTGACAATGTGCAGCA
GCAAATGGCCGCTATTCGAAGTCAGCCACCGTTACCGATTGAGCCTGCGCCTGTATTTATGCCTGTTCCGCCCTACCTTT
ATTCTGCCAATCAGTTACGCAATCCATTCTTGCCGAACTCGATTGCCGCAGAACTCAAGGTGATGTCTGGAAAACGCGTT
TACCCAAATCTATCCAGACCCAAACAGCCACTTGAAAGTTATGCGCTTGAATCATTAAACATGAAAGGCAGTATGCGCCG
CATCAATGGCCAAATTCTGGCATTAATTCAAACGCCTGATGGTGAAATTGAGCGTGTACAAATTGGCAATTATATGGGGC
TGAATGAAGGGCGGATTGTAGCCATCTCACCCACACAAATTGATTTAATGGAAATTGTGCCAGATGGACGTGATGGATTT
ATTGAACGGCCACGATCTTTGGTTTTAATTGGACCGAAGCCCTAG
ATGATACGTCAACTTCTGTGCTTGAGTGTGGTGGTGCTGGGGCTTGCGGGTTGTGATTCACGCATTGACAATGTGCAGCA
GCAAATGGCCGCTATTCGAAGTCAGCCACCGTTACCGATTGAGCCTGCGCCTGTATTTATGCCTGTTCCGCCCTACCTTT
ATTCTGCCAATCAGTTACGCAATCCATTCTTGCCGAACTCGATTGCCGCAGAACTCAAGGTGATGTCTGGAAAACGCGTT
TACCCAAATCTATCCAGACCCAAACAGCCACTTGAAAGTTATGCGCTTGAATCATTAAACATGAAAGGCAGTATGCGCCG
CATCAATGGCCAAATTCTGGCATTAATTCAAACGCCTGATGGTGAAATTGAGCGTGTACAAATTGGCAATTATATGGGGC
TGAATGAAGGGCGGATTGTAGCCATCTCACCCACACAAATTGATTTAATGGAAATTGTGCCAGATGGACGTGATGGATTT
ATTGAACGGCCACGATCTTTGGTTTTAATTGGACCGAAGCCCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comL | Acinetobacter baylyi ADP1 |
79.31 |
100 |
0.793 |
| pilP | Acinetobacter baumannii D1279779 |
70.52 |
99.425 |
0.701 |