Detailed information NTG0974728

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: QDT75_RS09915
• Genome accession: NZ_CP151078
• Coordinates: 2091499..2092200 (-)
• Length: 233 a.a.
• NCBI ID: WP_279722654.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain PUMA0052
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2086499..2097200

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QDT75_RS09885 (QDT75_09885)	-	2086805..2087248 (-)	444	WP_001246675.1	SRPBCC family protein	-
QDT75_RS09890 (QDT75_09890)	tadA	2087318..2087821 (-)	504	WP_272381665.1	tRNA adenosine(34) deaminase TadA	-
QDT75_RS09895 (QDT75_09895)	-	2087828..2088952 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
QDT75_RS09900 (QDT75_09900)	ung	2088949..2089662 (-)	714	WP_001177527.1	uracil-DNA glycosylase	-
QDT75_RS09905 (QDT75_09905)	-	2089713..2090309 (-)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
QDT75_RS09910 (QDT75_09910)	gspK	2090540..2091499 (-)	960	WP_279722655.1	type II secretion system minor pseudopilin GspK	-
QDT75_RS09915 (QDT75_09915)	xcpW	2091499..2092200 (-)	702	WP_279722654.1	type II secretion system minor pseudopilin GspJ	Machinery gene
QDT75_RS09920 (QDT75_09920)	xcpV	2092200..2092580 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
QDT75_RS09925 (QDT75_09925)	-	2092570..2093124 (-)	555	WP_000841373.1	type II secretion system protein	-
QDT75_RS09930 (QDT75_09930)	-	2093134..2093742 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
QDT75_RS09935 (QDT75_09935)	-	2093780..2094553 (-)	774	WP_005110997.1	TatD family hydrolase	-
QDT75_RS09940 (QDT75_09940)	-	2094571..2094912 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
QDT75_RS09945 (QDT75_09945)	-	2094924..2095904 (-)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
QDT75_RS09950 (QDT75_09950)	kdsB	2095916..2096677 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26674.67 Da
• Isoelectric Point: 9.6949

>NTDB_id=974728 QDT75_RS09915 WP_279722654.1 2091499..2092200(-) (xcpW) [Acinetobacter baumannii strain PUMA0052]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYKNLNTSNREQPFS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=974728 QDT75_RS09915 WP_279722654.1 2091499..2092200(-) (xcpW) [Acinetobacter baumannii strain PUMA0052]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATAAAAATTTAAATACTTCGAACAGAGAGCAACCTTTCTCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983