Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | AB4Y54_RS04255 | Genome accession | NZ_AP031325 |
| Coordinates | 760707..761057 (-) | Length | 116 a.a. |
| NCBI ID | WP_353300790.1 | Uniprot ID | - |
| Organism | Thermus thermophilus strain TF21 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 755707..766057
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB4Y54_RS04220 (TthTF21_08270) | trpS | 756546..757559 (+) | 1014 | WP_018461708.1 | tryptophan--tRNA ligase | - |
| AB4Y54_RS04225 (TthTF21_08280) | - | 757556..758212 (+) | 657 | WP_353300786.1 | chromosome segregation protein ScpA | - |
| AB4Y54_RS04230 (TthTF21_08290) | - | 758231..758785 (+) | 555 | WP_353300787.1 | Uma2 family endonuclease | - |
| AB4Y54_RS04235 (TthTF21_08300) | - | 758819..759181 (-) | 363 | WP_060384345.1 | DUF86 domain-containing protein | - |
| AB4Y54_RS04240 (TthTF21_08310) | - | 759168..759467 (-) | 300 | WP_008631315.1 | nucleotidyltransferase | - |
| AB4Y54_RS04245 (TthTF21_08320) | - | 759490..760032 (-) | 543 | WP_353300788.1 | Uma2 family endonuclease | - |
| AB4Y54_RS04250 (TthTF21_08330) | - | 760153..760458 (-) | 306 | WP_353300789.1 | DUF1640 domain-containing protein | - |
| AB4Y54_RS04255 (TthTF21_08340) | pilV | 760707..761057 (-) | 351 | WP_353300790.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| AB4Y54_RS04260 (TthTF21_08350) | comZ | 761288..762961 (-) | 1674 | WP_353300791.1 | pilus assembly PilX N-terminal domain-containing protein | Machinery gene |
| AB4Y54_RS04265 (TthTF21_08360) | pilA/pilA3 | 762972..763673 (-) | 702 | WP_014629427.1 | PilW family protein | Machinery gene |
| AB4Y54_RS04270 (TthTF21_08370) | pilA/pilA2 | 763670..764251 (-) | 582 | WP_353300792.1 | type II secretion system protein | Machinery gene |
| AB4Y54_RS04275 (TthTF21_08380) | pilA/pilA1 | 764286..764756 (-) | 471 | WP_165739610.1 | GspH/FimT family protein | Machinery gene |
| AB4Y54_RS04280 (TthTF21_08390) | - | 764922..765902 (+) | 981 | WP_353300793.1 | YpdA family putative bacillithiol disulfide reductase | - |
Sequence
Protein
Download Length: 116 a.a. Molecular weight: 12174.83 Da Isoelectric Point: 3.9798
>NTDB_id=97431 AB4Y54_RS04255 WP_353300790.1 760707..761057(-) (pilV) [Thermus thermophilus strain TF21]
MRNAKGFTLIELLIVIAIIAILAAVLIPNVLNARKRATDSAAQAFGRQVITWLAAADTAGVDVTEVTSCTDELLQAEGAP
AELPNGVAECSIEYDGAGQWTVTVTSDAGNTFTFTY
MRNAKGFTLIELLIVIAIIAILAAVLIPNVLNARKRATDSAAQAFGRQVITWLAAADTAGVDVTEVTSCTDELLQAEGAP
AELPNGVAECSIEYDGAGQWTVTVTSDAGNTFTFTY
Nucleotide
Download Length: 351 bp
>NTDB_id=97431 AB4Y54_RS04255 WP_353300790.1 760707..761057(-) (pilV) [Thermus thermophilus strain TF21]
ATGCGGAACGCGAAAGGTTTCACCCTGATTGAGCTCCTGATCGTCATCGCCATCATCGCCATCCTGGCGGCGGTGCTGAT
CCCGAACGTCTTGAACGCCCGCAAGCGGGCCACCGATAGCGCCGCTCAGGCCTTTGGCCGCCAAGTCATCACCTGGCTCG
CCGCCGCTGACACGGCCGGTGTGGACGTCACTGAGGTCACGAGCTGTACCGACGAGCTCCTTCAAGCGGAAGGGGCTCCC
GCTGAACTCCCCAATGGGGTAGCTGAGTGCTCCATCGAGTACGATGGCGCCGGTCAGTGGACGGTGACGGTCACGTCTGA
TGCCGGTAACACGTTCACCTTCACTTACTGA
ATGCGGAACGCGAAAGGTTTCACCCTGATTGAGCTCCTGATCGTCATCGCCATCATCGCCATCCTGGCGGCGGTGCTGAT
CCCGAACGTCTTGAACGCCCGCAAGCGGGCCACCGATAGCGCCGCTCAGGCCTTTGGCCGCCAAGTCATCACCTGGCTCG
CCGCCGCTGACACGGCCGGTGTGGACGTCACTGAGGTCACGAGCTGTACCGACGAGCTCCTTCAAGCGGAAGGGGCTCCC
GCTGAACTCCCCAATGGGGTAGCTGAGTGCTCCATCGAGTACGATGGCGCCGGTCAGTGGACGGTGACGGTCACGTCTGA
TGCCGGTAACACGTTCACCTTCACTTACTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
43.966 |
100 |
0.44 |
| pilA2 | Legionella pneumophila str. Paris |
41.739 |
99.138 |
0.414 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
40.87 |
99.138 |
0.405 |