Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | WMZ02_RS14400 | Genome accession | NZ_CP150864 |
| Coordinates | 3059914..3060558 (+) | Length | 214 a.a. |
| NCBI ID | WP_005480993.1 | Uniprot ID | Q87LA2 |
| Organism | Vibrio parahaemolyticus strain NJIFDCVp7 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3054914..3065558
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WMZ02_RS14385 (WMZ02_14385) | - | 3055398..3056843 (-) | 1446 | WP_021450081.1 | MSHA biogenesis protein MshI | - |
| WMZ02_RS14390 (WMZ02_14390) | csrD | 3056855..3058864 (-) | 2010 | WP_020841338.1 | RNase E specificity factor CsrD | - |
| WMZ02_RS14395 (WMZ02_14395) | ssb | 3059105..3059635 (-) | 531 | WP_005466625.1 | single-stranded DNA-binding protein | Machinery gene |
| WMZ02_RS14400 (WMZ02_14400) | qstR | 3059914..3060558 (+) | 645 | WP_005480993.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| WMZ02_RS14405 (WMZ02_14405) | galU | 3060816..3061688 (+) | 873 | WP_346338067.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| WMZ02_RS14410 (WMZ02_14410) | uvrA | 3061826..3064648 (+) | 2823 | WP_025547407.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 24386.20 Da Isoelectric Point: 8.7760
>NTDB_id=973186 WMZ02_RS14400 WP_005480993.1 3059914..3060558(+) (qstR) [Vibrio parahaemolyticus strain NJIFDCVp7]
MRKSAYARKLFLISMEDDAAQKVASLEKYIDMSIPVISTDALMEAKPEHRNKILLIDFSEHKSLVQSIKNLPLVWKNFET
VVFNVPKRLTTDELLAFGQLKGLFYSEDSLEQVGEGLKGIVNGQNWLPRNVTSQLLHYYRNVINTHTAPATVDLTIRELQ
VLRCLQAGASNSQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLMS
MRKSAYARKLFLISMEDDAAQKVASLEKYIDMSIPVISTDALMEAKPEHRNKILLIDFSEHKSLVQSIKNLPLVWKNFET
VVFNVPKRLTTDELLAFGQLKGLFYSEDSLEQVGEGLKGIVNGQNWLPRNVTSQLLHYYRNVINTHTAPATVDLTIRELQ
VLRCLQAGASNSQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLMS
Nucleotide
Download Length: 645 bp
>NTDB_id=973186 WMZ02_RS14400 WP_005480993.1 3059914..3060558(+) (qstR) [Vibrio parahaemolyticus strain NJIFDCVp7]
GTGAGAAAGTCGGCTTACGCAAGAAAGCTATTTCTGATTAGTATGGAAGACGATGCTGCGCAGAAAGTCGCATCATTAGA
AAAGTACATCGATATGAGCATTCCTGTAATCTCAACCGATGCCCTAATGGAAGCGAAACCCGAACATCGAAATAAAATTC
TACTCATTGACTTCAGTGAACATAAATCACTCGTTCAATCGATTAAAAACCTGCCATTGGTTTGGAAGAACTTTGAGACG
GTCGTGTTCAACGTTCCAAAGCGCCTCACTACGGATGAACTGCTCGCCTTCGGTCAATTAAAAGGCTTGTTTTACAGCGA
AGATTCTTTAGAACAAGTAGGCGAAGGACTGAAAGGCATTGTCAACGGGCAAAACTGGCTACCACGCAACGTAACCAGCC
AACTGCTGCACTACTATCGAAATGTGATAAATACTCACACCGCGCCAGCAACCGTCGATCTCACCATTCGCGAACTGCAA
GTGCTGCGTTGTCTGCAAGCTGGAGCATCGAATAGCCAGATGGCAGAAGAACTGTTTGTTAGCGAATTTACGATCAAGTC
GCACCTGTATCAGATCTTTAAAAAGCTCTCAGTGAAAAACCGAGTTCAAGCCATTGCTTGGGCCGATCAAAACTTGATGT
CTTAA
GTGAGAAAGTCGGCTTACGCAAGAAAGCTATTTCTGATTAGTATGGAAGACGATGCTGCGCAGAAAGTCGCATCATTAGA
AAAGTACATCGATATGAGCATTCCTGTAATCTCAACCGATGCCCTAATGGAAGCGAAACCCGAACATCGAAATAAAATTC
TACTCATTGACTTCAGTGAACATAAATCACTCGTTCAATCGATTAAAAACCTGCCATTGGTTTGGAAGAACTTTGAGACG
GTCGTGTTCAACGTTCCAAAGCGCCTCACTACGGATGAACTGCTCGCCTTCGGTCAATTAAAAGGCTTGTTTTACAGCGA
AGATTCTTTAGAACAAGTAGGCGAAGGACTGAAAGGCATTGTCAACGGGCAAAACTGGCTACCACGCAACGTAACCAGCC
AACTGCTGCACTACTATCGAAATGTGATAAATACTCACACCGCGCCAGCAACCGTCGATCTCACCATTCGCGAACTGCAA
GTGCTGCGTTGTCTGCAAGCTGGAGCATCGAATAGCCAGATGGCAGAAGAACTGTTTGTTAGCGAATTTACGATCAAGTC
GCACCTGTATCAGATCTTTAAAAAGCTCTCAGTGAAAAACCGAGTTCAAGCCATTGCTTGGGCCGATCAAAACTTGATGT
CTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
100 |
100 |
1 |
| qstR | Vibrio campbellii strain DS40M4 |
89.252 |
100 |
0.893 |
| qstR | Vibrio cholerae strain A1552 |
52.093 |
100 |
0.523 |