Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   AAAF57_RS07005 Genome accession   NZ_CP150847
Coordinates   1538579..1539580 (-) Length   333 a.a.
NCBI ID   WP_002886078.1    Uniprot ID   A0AB37CMJ0
Organism   Streptococcus salivarius strain KSS5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1533579..1544580
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAAF57_RS06980 (AAAF57_07020) - 1533982..1534167 (+) 186 WP_002886071.1 hypothetical protein -
  AAAF57_RS06985 (AAAF57_07025) eno 1534319..1535623 (-) 1305 WP_002886048.1 surface-displayed alpha-enolase -
  AAAF57_RS06990 (AAAF57_07030) - 1535829..1536284 (+) 456 WP_014634139.1 YueI family protein -
  AAAF57_RS06995 (AAAF57_07035) - 1536324..1537439 (-) 1116 WP_410536360.1 glycerate kinase -
  AAAF57_RS07000 (AAAF57_07040) - 1537452..1538519 (-) 1068 WP_002886051.1 MmcQ/YjbR family DNA-binding protein -
  AAAF57_RS07005 (AAAF57_07045) ccpA 1538579..1539580 (-) 1002 WP_002886078.1 catabolite control protein A Regulator
  AAAF57_RS07010 (AAAF57_07050) - 1539893..1540975 (+) 1083 WP_002886210.1 M24 family metallopeptidase -
  AAAF57_RS07015 (AAAF57_07055) - 1541075..1541443 (-) 369 WP_002886108.1 S1 RNA-binding domain-containing protein -
  AAAF57_RS07020 (AAAF57_07060) - 1541445..1542851 (-) 1407 WP_014634134.1 Cof-type HAD-IIB family hydrolase -
  AAAF57_RS07025 (AAAF57_07065) smpB 1542998..1543462 (-) 465 WP_014634133.1 SsrA-binding protein SmpB -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36660.58 Da        Isoelectric Point: 5.4827

>NTDB_id=972972 AAAF57_RS07005 WP_002886078.1 1538579..1539580(-) (ccpA) [Streptococcus salivarius strain KSS5]
MNTDETITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFA
TLARGIDDIATMYKYNIVLASSDENDDHEVTVINSLFAKQVDGIIFMGYHLTEKIRAEFSRTRTPIVLAGTVDLEHQLPS
VNIDYKAAVEDSITQLAKNNEKVAFVSGPLIDDINGKLRLAGYKAGLEKNNLRYNEGLVFEAKYSYKDGFDLAQRVLNSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPITSYTRPNLSSINHPLYDLGAVSMRMLTKIMNKEELEEKDV
ILNHGITLRQSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=972972 AAAF57_RS07005 WP_002886078.1 1538579..1539580(-) (ccpA) [Streptococcus salivarius strain KSS5]
ATGAATACTGATGAAACAATTACTATATACGACGTTGCGCGTGAAGCAGGTGTTTCGATGGCGACTGTGTCTCGTGTGGT
AAATGGAAATAAAAATGTAAAAGAAAACACCCGAAAAAAAGTGCTTGAGGTCATTGATCGTTTGGATTACCGTCCAAATG
CGGTTGCGCGTGGCTTGGCGAGTAAGAAAACCACTACTGTAGGAGTTGTCATCCCAAATATTGCTAATAGTTATTTTGCT
ACTTTAGCAAGGGGGATTGATGATATTGCAACCATGTACAAGTATAATATTGTTCTTGCATCTAGTGATGAAAATGACGA
TCACGAAGTTACCGTGATTAACTCTCTATTTGCCAAACAAGTAGACGGTATCATCTTCATGGGTTACCACTTGACGGAAA
AAATTCGTGCAGAATTTTCCCGTACTCGTACGCCGATTGTCCTAGCAGGAACAGTGGACCTCGAACACCAATTACCGAGT
GTTAACATCGACTATAAAGCTGCCGTTGAGGATTCTATAACACAGCTTGCCAAGAATAATGAAAAGGTTGCCTTTGTATC
AGGGCCACTAATTGATGATATTAATGGCAAGCTCCGTCTAGCTGGTTATAAGGCTGGACTTGAAAAGAATAATTTGCGCT
ACAATGAAGGACTAGTCTTTGAAGCTAAATATAGCTATAAAGATGGCTTTGATCTAGCACAACGTGTCTTGAACTCTGGT
GCCACTGCTGCCTATGTTGGAGAAGATGAATTGGCTGCAGGTCTCTTGAATGGCCTCTTTGCTGCAGGTAAATCAGTTCC
AGAAGACTTCGAAATCATCACAAGCAATGACTCACCAATTACAAGCTATACACGTCCAAACCTTTCTAGTATTAATCATC
CTCTCTATGATTTAGGGGCAGTTAGCATGCGTATGTTGACTAAAATCATGAATAAGGAAGAACTTGAAGAAAAAGATGTT
ATTCTTAATCACGGTATTACCTTACGTCAGTCAACAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.778

100

0.778

  ccpA Streptococcus pneumoniae D39

75.676

100

0.757

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556


Multiple sequence alignment