Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/comEC   Type   Machinery gene
Locus tag   ACLUR6_RS04185 Genome accession   NZ_CP178250
Coordinates   906003..908435 (+) Length   810 a.a.
NCBI ID   WP_168726476.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain ACI     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 901003..913435
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLUR6_RS04155 (ACLUR6_04155) - 901153..902094 (-) 942 WP_000795874.1 hypothetical protein -
  ACLUR6_RS04160 (ACLUR6_04160) - 902352..902837 (+) 486 WP_001985538.1 YaiI/YqxD family protein -
  ACLUR6_RS04165 (ACLUR6_04165) - 902848..903756 (+) 909 WP_128202374.1 DMT family transporter -
  ACLUR6_RS04170 (ACLUR6_04170) - 903786..903866 (-) 81 Protein_794 PilZ domain-containing protein -
  ACLUR6_RS04175 (ACLUR6_04175) - 904004..905239 (+) 1236 WP_001984636.1 lipoprotein-releasing ABC transporter permease subunit -
  ACLUR6_RS04180 (ACLUR6_04180) lolD 905232..905918 (+) 687 WP_032058272.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  ACLUR6_RS04185 (ACLUR6_04185) comA/comEC 906003..908435 (+) 2433 WP_168726476.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACLUR6_RS04190 (ACLUR6_04190) - 908388..909371 (-) 984 WP_001984639.1 lysophospholipid acyltransferase family protein -
  ACLUR6_RS04195 (ACLUR6_04195) sppA 909508..910524 (+) 1017 WP_001286615.1 signal peptide peptidase SppA -
  ACLUR6_RS04200 (ACLUR6_04200) - 910543..911352 (+) 810 WP_000114071.1 alpha/beta fold hydrolase -
  ACLUR6_RS04205 (ACLUR6_04205) purN 911416..912045 (-) 630 WP_098729345.1 phosphoribosylglycinamide formyltransferase -
  ACLUR6_RS04210 (ACLUR6_04210) purM 912042..913112 (-) 1071 WP_000071984.1 phosphoribosylformylglycinamidine cyclo-ligase -

Sequence


Protein


Download         Length: 810 a.a.        Molecular weight: 92495.87 Da        Isoelectric Point: 8.8556

>NTDB_id=971167 ACLUR6_RS04185 WP_168726476.1 906003..908435(+) (comA/comEC) [Acinetobacter baumannii strain ACI]
MFKIILLGWIGGIALMGIDFPLIMQYEKVGEALLLLAFIFYLYKRPMFVDRPFLKAVFCLLCTTSLFMVGYHYAEKALIE
RLEQRETDTRNLDIIVYINRLSEEKDNKVQQTAQVLNLSKEPVNWLLYLKSNNQNLLKNNQNLELGHYYRISGKTRPAHS
YATPGSFDQEKWFIQRNIMSGFNVRYIEPLSLDEIYRLGYQQHLKEQQSFSSSFRLNIEKLRLTFRQILNSSSLQQKGLI
LALLTGDESLLSDETQLQFKQLGISHLLAISGPHVFIFAIMLSWACHQFISRYYPKIYLWKPKQILMAVPCCLGVLIYTA
FVGFEIPALRTLLSTLIFIGFLLLKQPIKPFTLLVYSASLLLLMDPFSVLSAGFWLSYGACFILIRIYQTIAQLPEQHFL
SLSSKMIFMSKVLIESQGKIFIALSPLTLLFFQRISWVAPLTNIIAVPIVGSVIVPLNIIAACAWFVVKPFGNMLFHFND
MLLSILLSCLGLLEKLSLPLQGISLTPLSLLAISCAIIILFLPKGILPKTWGILCCLPLVMMNKTSQQIQLNILDVGQGQ
AIFLQHPQQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQGVRQLDHVVLSHLDQDHSGAFPIIQQEIPVKQLISNEQLPND
LKQPFQYCHQGQQWHYSELDIQILWPKEKDLAFVASNQNQYSCVVYLQFKKVGGYQNFLIMGDAGWEAEYELLKDYPNLK
IDVLVLGHHGSKHSSAYDFLATLKPKLAIASAGFDNRYGHPSQQVIARLKALHIPLKSTLEQGTLSFVLENHKLVLHDRR
LDRLWLSRGF

Nucleotide


Download         Length: 2433 bp        

>NTDB_id=971167 ACLUR6_RS04185 WP_168726476.1 906003..908435(+) (comA/comEC) [Acinetobacter baumannii strain ACI]
ATGTTTAAGATTATTCTATTGGGGTGGATTGGCGGTATTGCATTGATGGGAATAGATTTCCCTTTAATCATGCAATATGA
AAAAGTGGGCGAGGCTCTACTGTTACTTGCCTTTATTTTTTATCTTTATAAGCGCCCCATGTTCGTTGATCGACCATTTT
TAAAGGCAGTGTTTTGCTTATTATGTACAACAAGTCTTTTTATGGTTGGTTACCACTATGCTGAAAAAGCATTGATTGAA
CGATTAGAACAAAGAGAAACAGATACCCGAAATCTCGACATTATTGTTTATATAAACCGTTTAAGTGAAGAAAAAGATAA
TAAGGTTCAACAAACTGCACAAGTTCTAAATCTTTCTAAAGAACCGGTGAATTGGTTGCTATATTTAAAAAGTAATAATC
AAAATTTATTAAAGAATAATCAGAATCTTGAATTAGGTCACTATTATCGAATATCTGGAAAAACAAGACCTGCGCATAGT
TATGCCACCCCAGGATCTTTTGATCAGGAAAAGTGGTTTATTCAGCGAAATATTATGTCTGGTTTTAATGTGAGATATAT
TGAGCCTTTAAGTCTCGATGAAATCTATCGATTGGGCTATCAGCAACATTTAAAAGAACAACAGTCTTTTTCCAGTAGTT
TTCGTTTAAATATAGAAAAACTTCGCTTAACTTTTAGGCAAATATTAAACAGCTCATCTCTACAGCAAAAGGGTTTAATT
TTAGCTTTGCTGACAGGTGATGAAAGCCTTTTATCAGATGAAACTCAACTACAGTTCAAACAATTAGGAATTAGTCATTT
ATTGGCGATCTCAGGCCCACATGTGTTCATTTTTGCCATTATGTTATCTTGGGCATGTCATCAATTTATCAGTCGTTATT
ATCCTAAAATTTACTTATGGAAACCGAAACAGATTTTGATGGCTGTACCATGCTGCCTTGGTGTTTTAATTTATACTGCA
TTTGTAGGTTTCGAAATTCCTGCACTACGAACATTATTATCAACCCTTATATTTATTGGATTTCTATTATTAAAACAACC
TATTAAACCTTTTACATTACTCGTATATAGCGCAAGTCTACTGTTGCTAATGGACCCGTTTAGTGTGCTTTCTGCAGGTT
TTTGGCTGTCTTATGGGGCATGTTTTATTTTAATAAGAATTTACCAAACTATAGCGCAGCTACCTGAGCAACATTTTTTA
AGTCTGAGTTCAAAAATGATTTTTATGAGTAAGGTATTAATTGAATCTCAAGGCAAAATATTTATTGCATTGAGTCCCTT
AACCTTACTTTTCTTTCAACGAATTTCTTGGGTTGCTCCATTAACCAATATTATTGCCGTGCCTATTGTTGGTAGTGTTA
TTGTCCCTTTAAACATCATAGCTGCTTGCGCATGGTTTGTAGTAAAACCATTTGGAAATATGCTTTTTCATTTCAATGAT
ATGTTGCTCAGCATATTGCTGAGTTGTTTGGGCTTATTAGAAAAACTCTCTTTACCATTACAAGGTATAAGCTTGACGCC
ACTGTCTTTATTAGCGATTAGTTGTGCCATAATTATTTTATTTTTACCTAAAGGAATTCTGCCCAAAACTTGGGGAATAT
TATGTTGTTTACCCCTAGTTATGATGAACAAAACGAGTCAGCAAATTCAGCTTAATATTTTAGATGTTGGCCAGGGGCAG
GCTATTTTTCTACAACATCCCCAACAAAACTGGTTAATTGATACAGGCGGTTCTTACGATGAAAAAATATTTAGTATTGG
ACAAAATGTTGTAGTGCCTTTTCTACGTCAGCAAGGCGTAAGACAATTAGATCATGTTGTGCTATCCCATCTTGATCAAG
ACCATAGTGGCGCGTTTCCTATTATTCAACAAGAGATTCCTGTAAAGCAGCTTATTTCGAATGAACAATTACCAAATGAT
TTAAAGCAACCATTCCAATATTGCCATCAAGGGCAACAATGGCATTATTCTGAGTTAGATATTCAAATTTTATGGCCTAA
AGAAAAAGATCTGGCTTTTGTTGCTTCTAATCAGAATCAATATTCTTGTGTTGTATATCTTCAATTTAAAAAAGTTGGTG
GTTACCAAAATTTTCTTATTATGGGCGATGCTGGATGGGAAGCTGAATACGAGTTATTAAAAGATTATCCTAACTTGAAG
ATAGATGTGTTAGTGCTAGGGCATCATGGAAGTAAGCATAGTTCGGCTTATGATTTCTTGGCGACCTTAAAACCTAAACT
GGCCATTGCATCGGCAGGGTTTGATAACCGTTATGGCCATCCTAGCCAACAAGTTATAGCACGTTTAAAAGCTCTGCATA
TTCCGCTAAAAAGTACTTTGGAACAAGGGACCTTAAGTTTTGTGCTGGAAAACCACAAATTAGTTTTACATGACCGACGT
TTGGATCGGCTCTGGCTGAGTAGAGGTTTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baumannii strain A118

100

100

1

  comA/comEC Acinetobacter baumannii D1279779

97.407

100

0.974

  comEC Acinetobacter nosocomialis M2

84.035

99.753

0.838

  comA/comEC Acinetobacter baylyi ADP1

49.815

100

0.499


Multiple sequence alignment