Detailed information
Bioinformatically predicted
Overview
| Name | degQ | Type | Regulator |
| Locus tag | WHC13_RS17260 | Genome accession | NZ_CP150487 |
| Coordinates | 3256693..3256833 (-) | Length | 46 a.a. |
| NCBI ID | WP_003220708.1 | Uniprot ID | G4P060 |
| Organism | Bacillus subtilis strain JNF2 | ||
| Function | modification of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3251693..3261833
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHC13_RS17235 (WHC13_17235) | yuxO | 3252007..3252387 (-) | 381 | WP_003228810.1 | hotdog fold thioesterase | - |
| WHC13_RS17240 (WHC13_17240) | comA | 3252406..3253050 (-) | 645 | WP_003220716.1 | two-component system response regulator ComA | Regulator |
| WHC13_RS17245 (WHC13_17245) | comP | 3253131..3255439 (-) | 2309 | Protein_3333 | two-component system sensor histidine kinase ComP | - |
| WHC13_RS17250 (WHC13_17250) | comX | 3255454..3255621 (-) | 168 | WP_003242801.1 | competence pheromone ComX | Regulator |
| WHC13_RS17255 (WHC13_17255) | comQ | 3255609..3256508 (-) | 900 | WP_003243039.1 | ComX modifying isoprenyl transferase ComQ | Regulator |
| WHC13_RS17260 (WHC13_17260) | degQ | 3256693..3256833 (-) | 141 | WP_003220708.1 | degradation enzyme regulation protein DegQ | Regulator |
| WHC13_RS17265 (WHC13_17265) | - | 3257055..3257180 (+) | 126 | WP_003228793.1 | hypothetical protein | - |
| WHC13_RS17270 (WHC13_17270) | - | 3257294..3257662 (+) | 369 | WP_003243784.1 | hypothetical protein | - |
| WHC13_RS17275 (WHC13_17275) | pdeH | 3257638..3258867 (-) | 1230 | WP_003243525.1 | cyclic di-GMP phosphodiesterase | - |
| WHC13_RS17280 (WHC13_17280) | pncB | 3259004..3260476 (-) | 1473 | WP_003228788.1 | nicotinate phosphoribosyltransferase | - |
| WHC13_RS17285 (WHC13_17285) | pncA | 3260492..3261043 (-) | 552 | WP_003243099.1 | isochorismatase family cysteine hydrolase | - |
| WHC13_RS17290 (WHC13_17290) | yueI | 3261140..3261538 (-) | 399 | WP_003242987.1 | YueI family protein | - |
Sequence
Protein
Download Length: 46 a.a. Molecular weight: 5546.44 Da Isoelectric Point: 6.2559
>NTDB_id=970615 WHC13_RS17260 WP_003220708.1 3256693..3256833(-) (degQ) [Bacillus subtilis strain JNF2]
MEKKLEEVKQLLFRLELDIKETTDSLRNINKSIDQLDKYNYAMKIS
MEKKLEEVKQLLFRLELDIKETTDSLRNINKSIDQLDKYNYAMKIS
Nucleotide
Download Length: 141 bp
>NTDB_id=970615 WHC13_RS17260 WP_003220708.1 3256693..3256833(-) (degQ) [Bacillus subtilis strain JNF2]
ATGGAAAAGAAACTTGAAGAAGTAAAACAATTGTTATTCCGACTCGAACTTGATATTAAAGAAACGACAGATTCATTACG
AAACATTAACAAAAGCATTGATCAACTCGATAAATACAATTATGCAATGAAAATTTCGTGA
ATGGAAAAGAAACTTGAAGAAGTAAAACAATTGTTATTCCGACTCGAACTTGATATTAAAGAAACGACAGATTCATTACG
AAACATTAACAAAAGCATTGATCAACTCGATAAATACAATTATGCAATGAAAATTTCGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| degQ | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |