Detailed information
Bioinformatically predicted
Overview
| Name | comX | Type | Regulator |
| Locus tag | WHC13_RS17250 | Genome accession | NZ_CP150487 |
| Coordinates | 3255454..3255621 (-) | Length | 55 a.a. |
| NCBI ID | WP_003242801.1 | Uniprot ID | G9LQ80 |
| Organism | Bacillus subtilis strain JNF2 | ||
| Function | binding to ComP; trigger autophosphorylation of ComP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3250454..3260621
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WHC13_RS17220 (WHC13_17220) | mrpE | 3250850..3251326 (+) | 477 | WP_003244015.1 | Na+/H+ antiporter subunit E | - |
| WHC13_RS17225 (WHC13_17225) | mrpF | 3251326..3251610 (+) | 285 | WP_003228814.1 | Na(+)/H(+) antiporter subunit F1 | - |
| WHC13_RS17230 (WHC13_17230) | mnhG | 3251594..3251968 (+) | 375 | WP_003244302.1 | monovalent cation/H(+) antiporter subunit G | - |
| WHC13_RS17235 (WHC13_17235) | yuxO | 3252007..3252387 (-) | 381 | WP_003228810.1 | hotdog fold thioesterase | - |
| WHC13_RS17240 (WHC13_17240) | comA | 3252406..3253050 (-) | 645 | WP_003220716.1 | two-component system response regulator ComA | Regulator |
| WHC13_RS17245 (WHC13_17245) | comP | 3253131..3255439 (-) | 2309 | Protein_3333 | two-component system sensor histidine kinase ComP | - |
| WHC13_RS17250 (WHC13_17250) | comX | 3255454..3255621 (-) | 168 | WP_003242801.1 | competence pheromone ComX | Regulator |
| WHC13_RS17255 (WHC13_17255) | comQ | 3255609..3256508 (-) | 900 | WP_003243039.1 | ComX modifying isoprenyl transferase ComQ | Regulator |
| WHC13_RS17260 (WHC13_17260) | degQ | 3256693..3256833 (-) | 141 | WP_003220708.1 | degradation enzyme regulation protein DegQ | Regulator |
| WHC13_RS17265 (WHC13_17265) | - | 3257055..3257180 (+) | 126 | WP_003228793.1 | hypothetical protein | - |
| WHC13_RS17270 (WHC13_17270) | - | 3257294..3257662 (+) | 369 | WP_003243784.1 | hypothetical protein | - |
| WHC13_RS17275 (WHC13_17275) | pdeH | 3257638..3258867 (-) | 1230 | WP_003243525.1 | cyclic di-GMP phosphodiesterase | - |
| WHC13_RS17280 (WHC13_17280) | pncB | 3259004..3260476 (-) | 1473 | WP_003228788.1 | nicotinate phosphoribosyltransferase | - |
Sequence
Protein
Download Length: 55 a.a. Molecular weight: 6518.42 Da Isoelectric Point: 4.3285
>NTDB_id=970613 WHC13_RS17250 WP_003242801.1 3255454..3255621(-) (comX) [Bacillus subtilis strain JNF2]
MQDLINYFLNYPEALKKLKNKEACLIGFDVQETETIIKAYNDYYLADPITRQWGD
MQDLINYFLNYPEALKKLKNKEACLIGFDVQETETIIKAYNDYYLADPITRQWGD
Nucleotide
Download Length: 168 bp
>NTDB_id=970613 WHC13_RS17250 WP_003242801.1 3255454..3255621(-) (comX) [Bacillus subtilis strain JNF2]
ATGCAAGACCTAATTAACTACTTTTTAAATTATCCTGAGGCTTTAAAAAAATTGAAAAATAAAGAAGCCTGCCTTATAGG
TTTTGATGTGCAAGAAACTGAAACAATAATTAAAGCTTATAATGATTATTATCTGGCTGATCCAATAACCCGTCAATGGG
GTGATTAA
ATGCAAGACCTAATTAACTACTTTTTAAATTATCCTGAGGCTTTAAAAAAATTGAAAAATAAAGAAGCCTGCCTTATAGG
TTTTGATGTGCAAGAAACTGAAACAATAATTAAAGCTTATAATGATTATTATCTGGCTGATCCAATAACCCGTCAATGGG
GTGATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |