Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   R8749_RS04330 Genome accession   NZ_AP026801
Coordinates   913335..914606 (+) Length   423 a.a.
NCBI ID   WP_317698220.1    Uniprot ID   A0AAU9DDS6
Organism   Xylocopilactobacillus apis strain KimC2     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 908335..919606
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R8749_RS04300 (KIMC2_08670) rpsB 908653..909462 (+) 810 WP_317698214.1 30S ribosomal protein S2 -
  R8749_RS04305 (KIMC2_08680) tsf 909484..910359 (+) 876 WP_317698215.1 translation elongation factor Ts -
  R8749_RS04310 (KIMC2_08690) pyrH 910519..911244 (+) 726 WP_317698216.1 UMP kinase -
  R8749_RS04315 (KIMC2_08700) frr 911244..911801 (+) 558 WP_317698217.1 ribosome recycling factor -
  R8749_RS04320 (KIMC2_08710) - 911805..912527 (+) 723 WP_317698218.1 isoprenyl transferase -
  R8749_RS04325 (KIMC2_08720) - 912546..913325 (+) 780 WP_317698219.1 phosphatidate cytidylyltransferase -
  R8749_RS04330 (KIMC2_08730) eeP 913335..914606 (+) 1272 WP_317698220.1 RIP metalloprotease RseP Regulator
  R8749_RS04335 (KIMC2_08740) - 914616..916325 (+) 1710 WP_317698221.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 423 a.a.        Molecular weight: 46717.16 Da        Isoelectric Point: 8.0621

>NTDB_id=97055 R8749_RS04330 WP_317698220.1 913335..914606(+) (eeP) [Xylocopilactobacillus apis strain KimC2]
MKGIIVFLILFTILVVFHEFGHYFFAKKMGILVREFAIGMGPKIFQHHAQNGTTFTIRILPLGGYVRLAGVEESELEAGQ
TVYVTLNDQGSIIQIDTRSDQNIDGLPLTVRKSDLSSDLFIEGDVFDNEADDLVTKTFNVDHDAYIVENDGTEVRIAPKD
VQYNSAVWWKKLITNFAGPFNNIILAIVAFSISAFMMGGVQDLNTNKITIYDRNMPAAKAGIKSGDSIVSVDDVQTHDYK
EIKKELDKDQKGRPVKVKVKRSSHYKTFIIKPKYSKTDGTGRYYIGISVWYRKSFQSQILYGFTETYANSVAILQTLGSF
FTGGFSLDKIAGPVGIYSISSQAANSGVGVLVALCASLSISLAIANLLPIPGLDGGKILLNLIEAIRRKPIKQEHEVVVT
LIGAAFLLMLIIVVTVHDIMKLF

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=97055 R8749_RS04330 WP_317698220.1 913335..914606(+) (eeP) [Xylocopilactobacillus apis strain KimC2]
ATGAAGGGAATTATTGTTTTTTTAATTCTTTTTACAATTCTTGTTGTTTTCCATGAGTTTGGACACTACTTTTTTGCTAA
AAAGATGGGAATTTTAGTAAGAGAGTTTGCAATTGGAATGGGTCCAAAGATATTCCAGCACCATGCTCAAAATGGTACCA
CTTTTACAATTAGGATTTTACCTTTAGGTGGTTATGTCAGACTTGCTGGCGTTGAAGAATCTGAGTTAGAAGCCGGACAA
ACAGTTTACGTTACATTAAATGATCAAGGTTCAATAATCCAAATTGATACGAGATCAGATCAAAATATAGATGGTCTGCC
CCTTACTGTTCGAAAAAGTGACCTAAGCAGTGATTTATTTATTGAAGGCGATGTATTTGATAATGAAGCTGACGACCTTG
TAACTAAGACTTTTAACGTGGATCATGATGCATATATTGTTGAAAATGATGGAACTGAAGTTAGAATTGCACCAAAAGAT
GTTCAATATAATTCTGCCGTCTGGTGGAAAAAGCTGATAACGAATTTTGCAGGTCCTTTTAATAATATAATTTTAGCTAT
TGTAGCTTTCTCAATTTCGGCTTTTATGATGGGTGGGGTTCAAGACCTTAACACAAACAAGATTACCATTTATGATCGGA
ATATGCCTGCTGCAAAGGCAGGAATAAAAAGTGGTGATTCAATTGTTTCAGTCGATGATGTACAAACTCATGACTATAAA
GAAATAAAAAAAGAATTAGACAAAGACCAAAAAGGGAGACCGGTTAAAGTAAAAGTTAAAAGATCTAGTCATTACAAGAC
TTTTATTATTAAACCAAAATATAGTAAAACAGATGGTACTGGAAGATATTATATTGGAATATCAGTTTGGTACCGTAAGA
GTTTTCAATCGCAGATTTTATACGGTTTTACTGAAACTTATGCTAATTCAGTTGCAATACTACAGACTTTAGGTTCTTTT
TTTACTGGTGGTTTTTCACTTGATAAAATAGCGGGACCGGTCGGAATTTATAGTATTTCATCCCAAGCTGCTAATAGCGG
CGTAGGTGTTCTAGTGGCTTTATGCGCATCTCTATCAATTAGTTTGGCAATTGCTAATCTTTTACCAATACCGGGACTTG
ATGGTGGTAAAATTTTATTAAATTTAATTGAAGCTATTAGAAGAAAGCCAATTAAGCAAGAACATGAAGTTGTAGTTACA
TTAATTGGGGCGGCTTTCTTGCTAATGTTAATTATTGTAGTAACTGTTCATGATATTATGAAATTATTTTGA

Domains


Predicted by InterproScan.

(7-410)

(212-270)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

48.148

100

0.492

  eeP Streptococcus thermophilus LMG 18311

48.148

100

0.492


Multiple sequence alignment