Detailed information NTG0970242

Bioinformatically predicted

Overview

• Name: scnR
• Type: Regulator
• Locus tag: MHI55_RS02490
• Genome accession: NZ_CP150308
• Coordinates: 502218..502931 (+)
• Length: 237 a.a.
• NCBI ID: WP_339190160.1
• Uniprot ID: -
• Organism: Paenibacillus sp. FSL E2-0151
• Function: regulate comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 497218..507931

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MHI55_RS02465 (MHI55_02465)	-	497927..499183 (+)	1257	WP_340388633.1	DUF445 domain-containing protein	-
MHI55_RS02470 (MHI55_02470)	-	499268..499621 (-)	354	WP_036616662.1	YxeA family protein	-
MHI55_RS02475 (MHI55_02475)	-	499651..500382 (-)	732	WP_036616664.1	ABC transporter permease	-
MHI55_RS02480 (MHI55_02480)	-	500395..501144 (-)	750	WP_036673138.1	ABC transporter permease	-
MHI55_RS02485 (MHI55_02485)	-	501144..502061 (-)	918	WP_036616824.1	ABC transporter ATP-binding protein	-
MHI55_RS02490 (MHI55_02490)	scnR	502218..502931 (+)	714	WP_339190160.1	response regulator transcription factor	Regulator
MHI55_RS02495 (MHI55_02495)	-	502931..504313 (+)	1383	WP_340388635.1	HAMP domain-containing sensor histidine kinase	-
MHI55_RS02500 (MHI55_02500)	-	504590..504772 (+)	183	WP_339190157.1	type A2 lanthipeptide	-

Sequence

Protein

• Length: 237 a.a.
• Molecular weight: 27078.45 Da
• Isoelectric Point: 4.8542

>NTDB_id=970242 MHI55_RS02490 WP_339190160.1 502218..502931(+) (scnR) [Paenibacillus sp. FSL E2-0151]
MELLKNKKILIVDDEPEIREMIERFLRKEGFFRVYTADNFVNALAVCRLEKPDAAILDVMLPDGDGFSLLSSIRSFSDMP
VLFLSARGEDEDRLLGLGLGADDYMVKPFLPRELILRLMAILKRVYASNTVERLPVFRLGEQTIDLESAVVQGTDRELPL
TAKEHSILIKLYENQGRIVTSDALCQAVWGDESYGYENTLMVHVRRIREKIEEDPSKPIFLLTVRGLGYKLMAQEPR

Nucleotide

• Length: 714 bp

>NTDB_id=970242 MHI55_RS02490 WP_339190160.1 502218..502931(+) (scnR) [Paenibacillus sp. FSL E2-0151]
ATGGAATTATTGAAGAATAAGAAAATATTGATCGTAGATGATGAGCCCGAAATACGGGAAATGATTGAACGTTTTTTACG
GAAAGAAGGTTTTTTTCGGGTCTATACGGCCGATAACTTCGTGAATGCCTTGGCAGTATGCAGGCTTGAAAAACCGGATG
CAGCAATCCTGGACGTGATGCTTCCAGATGGGGATGGGTTCTCTCTGCTCTCTTCGATCCGGTCATTCTCGGACATGCCT
GTTCTGTTCCTGTCGGCACGTGGTGAAGATGAGGATCGATTGCTCGGTCTGGGGCTGGGAGCGGATGATTATATGGTCAA
GCCCTTTCTGCCAAGAGAGTTGATTCTCAGGCTGATGGCTATTCTGAAGCGGGTATATGCCTCCAATACGGTGGAGAGAT
TGCCTGTATTCCGTTTAGGTGAACAAACCATTGATCTGGAGAGTGCTGTTGTACAGGGGACAGACAGGGAGCTTCCATTG
ACAGCTAAGGAGCATTCCATACTGATCAAGTTGTATGAGAATCAAGGCCGGATTGTAACCAGTGATGCCCTGTGTCAAGC
CGTATGGGGAGACGAGAGTTATGGTTATGAAAATACACTGATGGTGCATGTTCGGCGAATCCGGGAGAAGATTGAGGAAG
ACCCATCCAAACCGATATTTTTGCTAACCGTTCGGGGACTTGGTTACAAACTGATGGCTCAGGAGCCTAGGTGA

Domains

Predicted by InterproScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (156-231)

• Response regulator receiver domain (Response_reg) (9-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
scnR	Streptococcus mutans UA159	50.661	95.781	0.485
micA	Streptococcus pneumoniae Cp1015	41.304	97.046	0.401
vicR	Streptococcus mutans UA159	39.056	98.312	0.384