Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   ACJWMC_RS09140 Genome accession   NZ_CP177181
Coordinates   1962223..1964571 (+) Length   782 a.a.
NCBI ID   WP_037598480.1    Uniprot ID   -
Organism   Streptococcus salivarius strain MRD1919     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1957223..1969571
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJWMC_RS09130 - 1959256..1961274 (-) 2019 WP_002891874.1 FtsX-like permease family protein -
  ACJWMC_RS09135 - 1961284..1962018 (-) 735 WP_002891877.1 ABC transporter ATP-binding protein -
  ACJWMC_RS09140 mutS/mutS2 1962223..1964571 (+) 2349 WP_037598480.1 endonuclease MutS2 Machinery gene
  ACJWMC_RS09145 - 1964673..1965215 (-) 543 WP_002891882.1 CvpA family protein -
  ACJWMC_RS09150 zapA 1965212..1965526 (-) 315 WP_004183554.1 cell division protein ZapA -
  ACJWMC_RS09155 rnhC 1965843..1966733 (+) 891 WP_037598481.1 ribonuclease HIII -
  ACJWMC_RS09160 lepB 1966752..1967375 (+) 624 WP_002891889.1 signal peptidase I -

Sequence

Protein


Download         Length: 782 a.a.        Molecular weight: 87643.98 Da        Isoelectric Point: 6.6233

>NTDB_id=969752 ACJWMC_RS09140 WP_037598480.1 1962223..1964571(+) (mutS/mutS2) [Streptococcus salivarius strain MRD1919]
MNTKILDQLEFNKVKDQFTEYLQTEQAQAELRDLVPMTNPERIQNQFTEIQEMAEIFVEHHGFAIGSLRDISEPLRRLEL
DADLNIQELIAIKKVLQASADLGRFYADLENVELIALKRLFEKIEAFPSLQGSLQSINDGGFIEHFASPELQNIRRQLKS
CDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRNRIAGVVHDISSSGNTVYIEPRAVIQLNEEITQLRADER
HEMARILHELSEQLRPQAAAIANNAWILGHMDFIRGKYLYLHDKKAVIPKISDNQTLQLLNVRHPLLVNPVANDLHFDED
LTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILNAAD
SNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPG
RSNAFEIARRLGLNEIIVKEAENLTDTDSDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE
LEKAQKEIQEMVDTALAESNSILKNLHDKSQLKPHEVIDAKGKLKKLAPQVDLSKNKVLRKAKKEKAARAPRVGDDIIVT
AYGQRGTLTSQAKNGNWEAQVGLIKMTLKADEFTLVRAQAEAQQPKKKQINVVKKAKKTSGGPRARLDLRGKRYEEAMQE
LDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGSGCTIATLG

Nucleotide


Download         Length: 2349 bp        

>NTDB_id=969752 ACJWMC_RS09140 WP_037598480.1 1962223..1964571(+) (mutS/mutS2) [Streptococcus salivarius strain MRD1919]
ATGAACACAAAGATTTTAGACCAATTAGAATTTAACAAGGTCAAGGACCAGTTCACAGAATACCTGCAGACTGAACAGGC
TCAGGCGGAGTTGCGTGACTTGGTGCCTATGACCAATCCAGAAAGAATTCAAAATCAATTTACAGAAATTCAAGAAATGG
CAGAGATTTTCGTAGAGCACCATGGCTTTGCCATTGGTAGCTTGCGAGATATTTCTGAGCCCTTGCGTCGTTTGGAACTG
GATGCTGACCTCAACATTCAGGAGCTCATTGCCATCAAGAAGGTGCTACAAGCTTCAGCTGACCTCGGTCGCTTTTACGC
TGACCTTGAAAATGTAGAACTTATCGCCCTTAAACGTCTTTTCGAAAAGATTGAAGCCTTCCCAAGTCTACAAGGCAGTC
TTCAGAGCATCAATGACGGTGGTTTTATTGAGCATTTTGCTAGCCCTGAGTTGCAAAATATTCGTCGTCAACTCAAATCT
TGTGATGATGCCATTCGCCAGACCTTACAAGACATTCTCAAGAAATCTGGCCACATGTTGGCTGAGAGTTTGATTGCTAG
TCGTAACGGTCGTTCGGTGCTTCCTGTCAAAAACACCTACCGTAACCGTATTGCTGGAGTTGTGCATGACATCTCAAGCT
CTGGAAACACAGTATATATCGAGCCACGTGCCGTTATCCAGCTTAACGAAGAAATTACACAATTACGTGCAGACGAACGC
CACGAGATGGCTCGTATCCTGCATGAACTGTCTGAACAACTACGCCCACAAGCTGCTGCTATTGCTAACAACGCTTGGAT
TTTGGGCCACATGGACTTCATTCGAGGAAAATACCTCTATCTCCATGATAAAAAAGCGGTTATTCCAAAGATTAGTGACA
ACCAAACACTACAACTACTTAACGTTCGTCACCCTCTTTTGGTCAATCCTGTAGCTAACGATTTGCACTTTGATGAGGAC
CTCACGGCCATTGTCATTACAGGTCCCAATACTGGTGGTAAGACCGTCATGCTTAAAACGCTAGGACTAGCACAACTAAT
GGCTCAATCTGGTCTGCCAATTTTGGCTGATAAGGGCAGCCGTGTCGCCATTTTCCAAGAGATTTTTGCGGACATCGGAG
ACGAACAGTCTATCGAACAAAGTTTGTCAACTTTCTCTAGTCACATGACCCACATTGTTGAGATTCTGAATGCTGCCGAC
AGTAACAGTCTGGTCTTGGTCGATGAGCTTGGGGCTGGTACCGACCCTCAGGAAGGAGCTAGTCTAGCCATGGCAATCTT
AGAGCACCTCCGTTTAAGTCAGATTAAGACCATGGCTACCACTCACTATCCTGAGCTTAAGGCCTATGGGATTGAGACGC
AACATGTGGAAAATGCCAGCATGGAGTTTGACACAGCGACTTTAAGCCCTACCTATCGTTTTATGCAAGGGGTTCCTGGT
CGTTCTAATGCCTTTGAAATTGCTCGACGCCTCGGTTTGAATGAGATTATTGTCAAGGAGGCAGAAAACCTCACTGATAC
TGATAGTGATGTCAACCGTATCATCGAGCAACTTGAAGCCCAAACTGTGGAAACACAAAAACGTCTGGAACACATCAAGG
ACGTGGAGCAAGAGAACCTTAAATTCAACCGTGCGGTCAAGAAACTCTATAACGAATTCTCCCATGAATACGACAAGGAA
CTCGAAAAGGCTCAAAAAGAAATTCAAGAGATGGTTGATACCGCTTTGGCTGAGAGCAATAGTATTCTCAAAAATCTCCA
CGATAAGAGTCAACTCAAACCTCATGAAGTTATCGACGCCAAAGGAAAACTCAAGAAACTTGCCCCACAAGTGGACCTCT
CTAAGAATAAGGTCCTTCGTAAGGCTAAGAAAGAAAAGGCTGCGCGTGCCCCTCGTGTTGGAGATGATATCATCGTTACC
GCCTATGGGCAACGGGGTACCCTTACCAGTCAAGCCAAAAATGGTAACTGGGAAGCTCAGGTCGGTCTCATCAAGATGAC
CCTCAAGGCAGACGAATTCACTCTGGTTCGTGCCCAAGCTGAAGCCCAACAACCTAAGAAGAAACAGATTAACGTGGTTA
AAAAAGCCAAGAAGACATCTGGCGGTCCTCGTGCCCGTCTAGACCTTCGTGGGAAACGTTACGAAGAAGCTATGCAAGAG
CTTGATGCCTTTATTGACCAAGCCCTACTTAATAACATGAGTCAGGTGGACATCATCCACGGTATTGGTACAGGTGTCAT
CCGTGATGCTGTTACCAAATATCTCCGCCGTCATCGCCATGTTAAAAGTTTTGAATATGCCCCACAAAGTGCTGGTGGTT
CCGGATGTACCATTGCAACCTTAGGGTAA

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(633-672)

Smr domain (Smr)

(707-781)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.596

100

0.402

Multiple sequence alignment