Detailed information    

insolico Bioinformatically predicted

Overview


Name   recG   Type   Machinery gene
Locus tag   ACLIMI_RS09010 Genome accession   NZ_CP177045
Coordinates   1736918..1738966 (+) Length   682 a.a.
NCBI ID   WP_009328528.1    Uniprot ID   Q65JR1
Organism   Bacillus licheniformis strain MPB11     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1731918..1743966
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLIMI_RS08980 (ACLIMI_08980) spoVM 1732465..1732545 (+) 81 WP_003221545.1 stage V sporulation protein SpoVM -
  ACLIMI_RS08985 (ACLIMI_08985) rpmB 1732650..1732838 (-) 189 WP_003181685.1 50S ribosomal protein L28 -
  ACLIMI_RS08990 (ACLIMI_08990) - 1733126..1733488 (+) 363 WP_003181687.1 Asp23/Gls24 family envelope stress response protein -
  ACLIMI_RS08995 (ACLIMI_08995) - 1733506..1735176 (+) 1671 WP_026699222.1 DAK2 domain-containing protein -
  ACLIMI_RS09000 (ACLIMI_09000) sdaAB 1735357..1736019 (+) 663 WP_003181691.1 L-serine ammonia-lyase, iron-sulfur-dependent subunit beta -
  ACLIMI_RS09005 (ACLIMI_09005) sdaAA 1736038..1736940 (+) 903 WP_009328529.1 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha -
  ACLIMI_RS09010 (ACLIMI_09010) recG 1736918..1738966 (+) 2049 WP_009328528.1 ATP-dependent DNA helicase RecG Machinery gene
  ACLIMI_RS09015 (ACLIMI_09015) fapR 1739083..1739649 (+) 567 WP_003181698.1 transcription factor FapR -
  ACLIMI_RS09020 (ACLIMI_09020) plsX 1739667..1740659 (+) 993 WP_003181700.1 phosphate acyltransferase PlsX -
  ACLIMI_RS09025 (ACLIMI_09025) fabD 1740677..1741636 (+) 960 WP_003181702.1 ACP S-malonyltransferase -
  ACLIMI_RS09030 (ACLIMI_09030) fabG 1741623..1742366 (+) 744 WP_003181704.1 3-oxoacyl-[acyl-carrier-protein] reductase -
  ACLIMI_RS09035 (ACLIMI_09035) acpP 1742443..1742676 (+) 234 WP_003181706.1 acyl carrier protein -
  ACLIMI_RS09040 (ACLIMI_09040) rnc 1742818..1743567 (+) 750 WP_009328527.1 ribonuclease III -

Sequence


Protein


Download         Length: 682 a.a.        Molecular weight: 77627.13 Da        Isoelectric Point: 7.3550

>NTDB_id=969331 ACLIMI_RS09010 WP_009328528.1 1736918..1738966(+) (recG) [Bacillus licheniformis strain MPB11]
MEHNLQLSISVIKGVGTETEKTLNELGIYTVLDLLNYFPYRYDDYELRDLEDVAHDERVTVEGKVHSEPSLAYYGKKRSR
LTFRLLVGNYLITAVCFNRPYLKKKLAIGSIVTVTGKWDKHRQSVMVQELKNGPHQGDQSIEPVYSVKENITVKTMRKLI
QEAVRSHLPFAEDPLPEKLRTAYKLLSYQEAVKAMHKPESREALKHARRRFVYEEFLLFQLKMQALRKFEREASDGISHT
FRLEDVNSFVKSLPFPLTNAQAKALDDILRDMASGYKMNRLLQGDVGSGKTAVAAIALYASLLSGFQGAMMVPTEILAEQ
HADSLVSLFEQHDVNVALLTSSVKGKRRRELLERLKEGEIDILVGTHALIQDDVHFKQLGLVITDEQHRFGVEQRKKLRS
KGKDPDVLFMTATPIPRTLAITVFGEMDVSVIDEMPAGRKRIETYWVKHDMLERILAFIDKELKKGRQAYVICPLIEESD
KLDVQNAIDVHSMLTHAFRGRWQIGLMHGKLSNDEKEQVMRQFSKNECQILVSTTVVEVGVNVPNATVMLIYDADRFGLS
QLHQLRGRVGRGDHQSYCILMADPKSETGKERMSIMSETTDGFELSEKDLELRGPGDFFGKKQSGMPEFKVADMVHDYRA
LETARRDAAELVSSKAFWTDAEYKSLREHLQNSGVMDGEKLS

Nucleotide


Download         Length: 2049 bp        

>NTDB_id=969331 ACLIMI_RS09010 WP_009328528.1 1736918..1738966(+) (recG) [Bacillus licheniformis strain MPB11]
GTGGAACACAATCTGCAACTTAGTATATCTGTTATAAAAGGCGTCGGGACGGAAACGGAAAAAACGTTGAACGAGCTCGG
AATCTATACGGTTCTCGATCTTTTAAACTACTTCCCGTACCGATATGACGATTATGAATTGCGCGATTTGGAAGATGTGG
CACACGATGAACGAGTGACGGTGGAAGGGAAGGTTCACAGCGAGCCTTCTCTTGCCTATTACGGGAAAAAGCGGAGCCGT
CTCACGTTCCGGCTTTTGGTCGGGAACTATTTGATCACAGCGGTTTGCTTTAACAGGCCTTATTTGAAAAAAAAGCTTGC
GATCGGCTCGATTGTTACCGTAACCGGAAAATGGGACAAGCACAGACAATCCGTGATGGTGCAAGAGCTGAAAAACGGGC
CGCACCAGGGTGATCAGTCGATTGAACCCGTATACTCCGTCAAAGAAAACATCACCGTAAAGACGATGAGGAAATTGATT
CAGGAAGCTGTCCGCAGCCATTTGCCGTTTGCCGAAGATCCTCTTCCGGAAAAGCTTCGGACCGCCTACAAACTTCTGTC
TTACCAGGAGGCGGTAAAGGCGATGCACAAGCCCGAGTCGAGGGAAGCTTTAAAGCATGCGCGGCGCCGTTTTGTATATG
AGGAATTTTTGCTGTTTCAGCTGAAAATGCAGGCTTTGCGAAAGTTCGAGCGGGAAGCGTCCGACGGAATCAGCCACACC
TTTCGGCTCGAAGACGTCAATTCGTTTGTCAAAAGCCTTCCGTTTCCTTTGACAAACGCGCAGGCGAAAGCGCTCGACGA
CATATTAAGGGACATGGCTTCAGGGTATAAAATGAATCGGCTTTTGCAAGGAGACGTCGGTTCAGGCAAAACAGCCGTCG
CCGCGATTGCGCTATACGCCTCGCTGCTTTCCGGATTCCAGGGGGCGATGATGGTGCCGACCGAAATACTGGCGGAACAG
CACGCCGATTCGCTTGTATCCCTCTTTGAGCAGCACGACGTCAATGTGGCGCTTTTAACAAGCTCTGTGAAAGGGAAAAG
GAGAAGAGAGCTTTTAGAAAGATTAAAAGAAGGAGAAATTGATATTTTGGTGGGGACGCACGCCCTTATTCAGGACGATG
TCCACTTTAAACAGCTCGGGCTCGTGATCACCGATGAACAGCACCGCTTCGGCGTCGAGCAAAGAAAAAAACTGAGAAGC
AAAGGGAAAGATCCCGATGTCTTGTTTATGACGGCGACGCCGATTCCGAGAACACTGGCGATCACGGTTTTCGGGGAAAT
GGATGTGTCCGTCATCGATGAAATGCCGGCTGGGCGAAAGCGGATCGAGACGTATTGGGTAAAGCACGACATGCTCGAAC
GGATTCTCGCGTTTATCGATAAAGAACTGAAAAAAGGCAGACAGGCGTATGTGATCTGTCCCTTGATTGAAGAGTCGGAC
AAGCTCGACGTTCAAAATGCAATTGATGTGCACAGCATGCTGACTCATGCCTTCAGGGGAAGATGGCAGATCGGTCTCAT
GCACGGAAAGCTGTCAAATGACGAGAAAGAACAGGTAATGAGGCAGTTCAGCAAAAACGAATGCCAGATTCTCGTTTCCA
CAACCGTCGTTGAAGTCGGGGTAAACGTTCCGAATGCGACGGTCATGCTGATCTATGATGCCGACCGGTTCGGTCTTTCC
CAGCTGCATCAGCTTCGCGGCCGGGTCGGACGGGGCGATCACCAGTCGTATTGCATCCTGATGGCAGACCCGAAATCTGA
GACGGGAAAAGAGCGCATGAGCATCATGTCTGAGACGACGGACGGCTTTGAGCTTTCTGAAAAAGATCTTGAACTCAGAG
GGCCCGGGGACTTTTTCGGCAAGAAACAGAGCGGGATGCCGGAGTTTAAAGTCGCCGACATGGTTCACGACTACCGCGCG
CTGGAAACGGCAAGAAGAGACGCTGCAGAACTTGTCTCTTCAAAAGCGTTCTGGACGGATGCCGAATATAAAAGCCTGCG
GGAACACTTGCAAAACAGCGGGGTTATGGACGGAGAGAAGCTGAGCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q65JR1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Bacillus subtilis subsp. subtilis str. 168

81.085

100

0.811

  recG/mmsA Streptococcus pneumoniae R6

49.185

98.974

0.487

  recG/mmsA Streptococcus pneumoniae R36A

49.185

98.974

0.487

  recG Neisseria meningitidis strain C311

39.445

95.161

0.375