Detailed information NTG0969306

Bioinformatically predicted

Overview

• Name: scnR
• Type: Regulator
• Locus tag: MHI48_RS02190
• Genome accession: NZ_CP150279
• Coordinates: 461334..462047 (+)
• Length: 237 a.a.
• NCBI ID: WP_036616668.1
• Uniprot ID: A0AAN4L6C1
• Organism: Paenibacillus sp. FSL H7-0942
• Function: regulate comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 456334..467047

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MHI48_RS02165 (MHI48_02165)	-	457042..458298 (+)	1257	WP_076253896.1	DUF445 domain-containing protein	-
MHI48_RS02170 (MHI48_02170)	-	458384..458737 (-)	354	WP_076329726.1	YxeA family protein	-
MHI48_RS02175 (MHI48_02175)	-	458767..459498 (-)	732	WP_036616664.1	ABC transporter permease	-
MHI48_RS02180 (MHI48_02180)	-	459511..460260 (-)	750	WP_036673138.1	ABC transporter permease	-
MHI48_RS02185 (MHI48_02185)	-	460260..461180 (-)	921	WP_370511453.1	ABC transporter ATP-binding protein	-
MHI48_RS02190 (MHI48_02190)	scnR	461334..462047 (+)	714	WP_036616668.1	response regulator transcription factor	Regulator
MHI48_RS02195 (MHI48_02195)	-	462047..463429 (+)	1383	WP_076329727.1	sensor histidine kinase KdpD	-
MHI48_RS02200 (MHI48_02200)	-	463705..463887 (+)	183	WP_036616672.1	type A2 lanthipeptide	-

Sequence

Protein

• Length: 237 a.a.
• Molecular weight: 27063.53 Da
• Isoelectric Point: 5.2460

>NTDB_id=969306 MHI48_RS02190 WP_036616668.1 461334..462047(+) (scnR) [Paenibacillus sp. FSL H7-0942]
MELLKNKKILIVDDEPEIREMIERFLRKEGFFRIYTAGNFVNALAVCRLEKPDAAILDVMLPDGDGFSLLSSIRSFSDMP
VLFLSARGEDEDRLLGLGLGADDYMVKPFLPRELILRLMAILKRVYASNTVERLPVFRLGGQTIDLESAVVQRTDRELPL
TAKEHAILIKLYENQGRIVTSDALCQAVWGDESYGYENTLMVHVRRIREKIEEDPSKPIFLLTVRGLGYKLMVQESR

Nucleotide

• Length: 714 bp

>NTDB_id=969306 MHI48_RS02190 WP_036616668.1 461334..462047(+) (scnR) [Paenibacillus sp. FSL H7-0942]
ATGGAATTATTGAAGAATAAGAAAATATTGATCGTAGATGATGAGCCCGAAATACGGGAAATGATTGAACGTTTTTTACG
GAAAGAAGGTTTTTTTCGGATCTATACGGCTGGTAACTTCGTGAATGCCTTGGCGGTATGCAGACTTGAAAAGCCGGATG
CAGCTATTCTGGATGTGATGCTTCCGGATGGAGATGGGTTCTCTCTGCTCTCTTCGATCCGGTCATTCTCGGACATGCCT
GTTCTGTTCCTGTCTGCACGTGGTGAAGATGAGGATCGACTGCTCGGTCTGGGGCTTGGAGCAGATGATTATATGGTCAA
GCCCTTTCTGCCAAGAGAGTTGATTCTCCGGCTTATGGCTATTCTGAAGCGGGTATATGCTTCCAACACAGTGGAGAGAT
TGCCTGTATTTCGTTTGGGTGGACAAACCATTGATCTGGAGAGCGCTGTTGTACAGAGGACAGACAGGGAGCTTCCATTG
ACAGCTAAGGAGCATGCCATACTGATCAAGTTGTATGAGAATCAGGGCCGAATTGTAACCAGTGATGCTCTGTGTCAAGC
CGTCTGGGGAGACGAGAGTTATGGGTATGAGAATACCCTGATGGTGCATGTTCGGCGAATCCGGGAGAAGATTGAGGAAG
ATCCATCCAAACCGATATTTCTGCTGACGGTACGGGGACTTGGTTATAAATTGATGGTTCAGGAGTCTAGGTAA

Domains

Predicted by InterproScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (156-231)

• Response regulator receiver domain (Response_reg) (9-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
scnR	Streptococcus mutans UA159	50.218	96.624	0.485
micA	Streptococcus pneumoniae Cp1015	40.87	97.046	0.397
vicR	Streptococcus mutans UA159	40.175	96.624	0.388