Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   MHH79_RS16290 Genome accession   NZ_CP150275
Coordinates   3119393..3120295 (-) Length   300 a.a.
NCBI ID   WP_100505763.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-0993     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3114393..3125295
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHH79_RS16255 (MHH79_16255) - 3114638..3115114 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  MHH79_RS16260 (MHH79_16260) - 3115114..3115398 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  MHH79_RS16265 (MHH79_16265) mnhG 3115382..3115756 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  MHH79_RS16270 (MHH79_16270) - 3115795..3116175 (-) 381 WP_015483631.1 hotdog fold thioesterase -
  MHH79_RS16275 (MHH79_16275) comA 3116193..3116837 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  MHH79_RS16280 (MHH79_16280) comP 3116918..3119227 (-) 2310 WP_340034721.1 two-component system sensor histidine kinase ComP Regulator
  MHH79_RS16285 (MHH79_16285) comX 3119242..3119409 (-) 168 WP_100505762.1 competence pheromone ComX Regulator
  MHH79_RS16290 (MHH79_16290) comQ 3119393..3120295 (-) 903 WP_100505763.1 polyprenyl synthetase family protein Regulator
  MHH79_RS16295 (MHH79_16295) degQ 3120480..3120620 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  MHH79_RS16300 (MHH79_16300) - 3120842..3120967 (+) 126 WP_154796978.1 hypothetical protein -
  MHH79_RS16305 (MHH79_16305) - 3121082..3121450 (+) 369 WP_015483634.1 hypothetical protein -
  MHH79_RS16310 (MHH79_16310) pdeH 3121426..3122655 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  MHH79_RS16315 (MHH79_16315) - 3122792..3124264 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  MHH79_RS16320 (MHH79_16320) - 3124280..3124831 (-) 552 WP_251217615.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 300 a.a.        Molecular weight: 34356.43 Da        Isoelectric Point: 5.4787

>NTDB_id=969134 MHH79_RS16290 WP_100505763.1 3119393..3120295(-) (comQ) [Bacillus sp. FSL K6-0993]
MKEIVKQNIFNEDLSQLLYSFIDAKETFSFAESAILHYVVFGGENLDVATRLGAGIEILILSSDIMDDLEDEDNHHALWM
KINRSESLNAALSLYTVGLRSIYSLNNNPLIFKYVLKYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV
LLATGEYNETVERYSYYKGIIAQISGDYHVLLSGKRSDIEKKKQTLIYLYLKRLFNNASEELLYLFSHKDLYYKALLEKD
KFEEKLIKAGVTQYISVLLQIYIQKCFSAIEQLNLEKEKKELIKEGLLSYKKGDKDARPN

Nucleotide


Download         Length: 903 bp        

>NTDB_id=969134 MHH79_RS16290 WP_100505763.1 3119393..3120295(-) (comQ) [Bacillus sp. FSL K6-0993]
ATGAAGGAGATTGTTAAGCAAAACATATTTAACGAAGATTTGTCACAACTTCTTTACTCATTTATTGATGCTAAAGAAAC
ATTCTCCTTTGCTGAATCCGCAATCTTACATTATGTTGTTTTTGGAGGGGAGAATTTAGATGTTGCAACAAGGCTTGGCG
CGGGAATAGAAATTCTCATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCATTATGGATG
AAAATTAATCGTTCAGAGTCGTTAAATGCAGCACTTTCCTTGTATACAGTAGGATTAAGAAGTATTTATTCATTAAATAA
CAATCCTCTAATTTTTAAATATGTTTTAAAATACGTAAACGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CTAAAACTGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTCTGATTGCACTAGCAAATGTAGCAGGTGTT
TTATTGGCTACAGGAGAATATAATGAAACAGTTGAAAGATATTCCTACTATAAAGGGATTATAGCTCAAATTTCTGGAGA
TTATCATGTTCTTTTATCCGGAAAACGCAGTGATATTGAAAAAAAGAAACAAACACTGATTTACTTATATCTTAAGCGAT
TATTTAATAATGCTTCGGAAGAATTATTATACTTATTTTCACATAAAGATTTATATTATAAAGCATTATTAGAAAAAGAT
AAATTCGAAGAAAAATTAATTAAGGCAGGAGTTACTCAATACATTTCGGTATTATTGCAGATATACATACAGAAATGTTT
TTCTGCTATAGAACAATTAAATTTAGAAAAAGAAAAAAAAGAGTTAATAAAGGAAGGCTTATTGAGTTATAAAAAGGGGG
ATAAAGATGCAAGACCTAATTAA

Domains


Predicted by InterproScan.

(44-219)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

91.304

99.667

0.91


Multiple sequence alignment