Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGA   Type   Machinery gene
Locus tag   MHI44_RS02975 Genome accession   NZ_CP150268
Coordinates   556617..557687 (-) Length   356 a.a.
NCBI ID   WP_004399124.1    Uniprot ID   A0A809FNW6
Organism   Bacillus sp. FSL K6-1366     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 551617..562687
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MHI44_RS02930 (MHI44_02930) tapA 552095..552856 (-) 762 WP_029726724.1 amyloid fiber anchoring/assembly protein TapA -
  MHI44_RS02935 (MHI44_02935) - 553128..553454 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  MHI44_RS02940 (MHI44_02940) - 553496..553675 (-) 180 WP_014480252.1 YqzE family protein -
  MHI44_RS02945 (MHI44_02945) comGG 553747..554121 (-) 375 WP_029726722.1 ComG operon protein ComGG Machinery gene
  MHI44_RS02950 (MHI44_02950) comGF 554122..554505 (-) 384 WP_029317913.1 ComG operon protein ComGF Machinery gene
  MHI44_RS02955 (MHI44_02955) comGE 554531..554878 (-) 348 WP_014480255.1 ComG operon protein 5 Machinery gene
  MHI44_RS02960 (MHI44_02960) comGD 554862..555293 (-) 432 WP_014480256.1 comG operon protein ComGD Machinery gene
  MHI44_RS02965 (MHI44_02965) comGC 555283..555579 (-) 297 WP_003230162.1 comG operon protein ComGC Machinery gene
  MHI44_RS02970 (MHI44_02970) comGB 555593..556630 (-) 1038 WP_029317912.1 comG operon protein ComGB Machinery gene
  MHI44_RS02975 (MHI44_02975) comGA 556617..557687 (-) 1071 WP_004399124.1 competence protein ComGA Machinery gene
  MHI44_RS02980 (MHI44_02980) - 557899..558096 (-) 198 WP_014480259.1 CBS domain-containing protein -
  MHI44_RS02985 (MHI44_02985) corA 558098..559051 (-) 954 WP_015483432.1 magnesium transporter CorA -
  MHI44_RS02990 (MHI44_02990) - 559194..560522 (+) 1329 WP_003230150.1 hemolysin family protein -
  MHI44_RS02995 (MHI44_02995) rsbRD 560575..561411 (-) 837 WP_041850019.1 RsbT co-antagonist protein RsbRD -
  MHI44_RS03005 (MHI44_03005) mgsR 561635..562015 (-) 381 WP_014477337.1 transcriptional regulator MgsR -
  MHI44_RS03010 (MHI44_03010) - 562247..562492 (+) 246 WP_003226300.1 DUF2626 domain-containing protein -

Sequence


Protein


Download         Length: 356 a.a.        Molecular weight: 40458.64 Da        Isoelectric Point: 9.0175

>NTDB_id=968794 MHI44_RS02975 WP_004399124.1 556617..557687(-) (comGA) [Bacillus sp. FSL K6-1366]
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=968794 MHI44_RS02975 WP_004399124.1 556617..557687(-) (comGA) [Bacillus sp. FSL K6-1366]
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAAGCATATCTAACAAAGGCTTCTGATATTCACATTGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGGCTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCAACTGGTTCAGGGAAGACTACCACACTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGACCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCCATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATTGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGTCGCCAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTTTACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGGAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A809FNW6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGA Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment