Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | J215_RS02340 | Genome accession | NZ_CP176783 |
| Coordinates | 508857..509222 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain J215 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 503857..514222
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J215_RS02310 (J215_000450) | pyrR | 504479..504991 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| J215_RS02315 (J215_000451) | ruvX | 505103..505537 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| J215_RS02320 (J215_000452) | - | 505537..506106 (-) | 570 | WP_003100947.1 | YqgE/AlgH family protein | - |
| J215_RS02325 (J215_000453) | - | 506155..507048 (-) | 894 | WP_003084580.1 | TonB family protein | - |
| J215_RS02330 (J215_000454) | gshB | 507195..508148 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| J215_RS02335 (J215_000455) | pilG | 508403..508810 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| J215_RS02340 (J215_000456) | pilH | 508857..509222 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| J215_RS02345 (J215_000457) | - | 509273..509809 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| J215_RS02350 (J215_000458) | pilJ | 509894..511942 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| J215_RS02355 (J215_000459) | pilK | 512003..512878 (+) | 876 | WP_003100938.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=968790 J215_RS02340 WP_003084587.1 508857..509222(+) (pilH) [Pseudomonas aeruginosa strain J215]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=968790 J215_RS02340 WP_003084587.1 508857..509222(+) (pilH) [Pseudomonas aeruginosa strain J215]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |