Detailed information NTG0968775

Bioinformatically predicted

Overview

• Name: scnR
• Type: Regulator
• Locus tag: NZ043_RS11585
• Genome accession: NZ_CP150267
• Coordinates: 2592518..2593231 (+)
• Length: 237 a.a.
• NCBI ID: WP_074093207.1
• Uniprot ID: -
• Organism: Paenibacillus sp. FSL k6-2145
• Function: regulate comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 2587518..2598231

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NZ043_RS11560 (NZ043_11560)	-	2588227..2589483 (+)	1257	WP_339311866.1	DUF445 domain-containing protein	-
NZ043_RS11565 (NZ043_11565)	-	2589568..2589921 (-)	354	WP_091038110.1	YxeA family protein	-
NZ043_RS11570 (NZ043_11570)	-	2589951..2590682 (-)	732	WP_339311869.1	ABC transporter permease	-
NZ043_RS11575 (NZ043_11575)	-	2590695..2591444 (-)	750	WP_091038114.1	ABC transporter permease	-
NZ043_RS11580 (NZ043_11580)	-	2591444..2592361 (-)	918	WP_091038361.1	ABC transporter ATP-binding protein	-
NZ043_RS11585 (NZ043_11585)	scnR	2592518..2593231 (+)	714	WP_074093207.1	response regulator transcription factor	Regulator
NZ043_RS11590 (NZ043_11590)	-	2593231..2594613 (+)	1383	WP_091038116.1	HAMP domain-containing sensor histidine kinase	-
NZ043_RS11595 (NZ043_11595)	-	2594891..2595073 (+)	183	WP_074093209.1	type A2 lanthipeptide	-

Sequence

Protein

• Length: 237 a.a.
• Molecular weight: 27038.38 Da
• Isoelectric Point: 4.8542

>NTDB_id=968775 NZ043_RS11585 WP_074093207.1 2592518..2593231(+) (scnR) [Paenibacillus sp. FSL k6-2145]
MELLKNKKILIVDDEPEIREMIERFLRKEGFFRVYTADNFVNALAVCRLEKPDAAILDVMLPDGDGFSLLSSIRSFSDMP
VLFLSARGEDEDRLLGLGLGADDYMVKPFLPRELILRLMAILKRVYASNTVERLPVFRLGEQTIDLESAVVQGTDRELPL
TAKEHAILIKLYENQGRIVTSDALCQAVWGDESYGYENTLMVHVRRIREKIEEDPSKPVFLLTVRGLGYKLMAQESR

Nucleotide

• Length: 714 bp

>NTDB_id=968775 NZ043_RS11585 WP_074093207.1 2592518..2593231(+) (scnR) [Paenibacillus sp. FSL k6-2145]
ATGGAATTATTGAAGAATAAGAAAATATTGATCGTAGATGATGAACCTGAGATACGGGAAATGATTGAACGTTTTTTACG
TAAAGAAGGTTTTTTTCGGGTCTATACGGCCGATAACTTCGTGAATGCGTTGGCAGTATGCAGGCTTGAAAAGCCGGATG
CAGCAATCCTGGACGTGATGCTTCCAGATGGGGATGGGTTCTCTCTGCTCTCTTCGATCCGGTCATTCTCGGACATGCCT
GTTCTGTTTCTGTCGGCACGTGGTGAAGATGAGGATCGATTGCTCGGTCTGGGGCTGGGAGCGGATGATTATATGGTCAA
GCCCTTTCTGCCAAGAGAGTTGATTCTCAGGCTGATGGCTATTCTGAAGCGGGTATATGCCTCCAATACGGTGGAGAGAT
TGCCTGTATTCCGTTTAGGTGAACAAACCATTGATCTGGAGAGTGCTGTTGTGCAGGGGACAGACAGGGAGCTTCCATTG
ACAGCTAAGGAGCACGCCATACTGATCAAGTTGTATGAGAATCAAGGCCGGATTGTAACCAGCGATGCCCTGTGTCAAGC
CGTATGGGGAGACGAGAGTTATGGTTATGAAAATACACTGATGGTGCATGTTCGGCGAATCCGGGAGAAGATTGAGGAAG
ACCCATCCAAACCGGTATTTTTGCTAACCGTTCGGGGCCTTGGTTACAAACTGATGGCTCAGGAGTCTAGGTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (9-117)

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (156-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
scnR	Streptococcus mutans UA159	50.22	95.781	0.481
micA	Streptococcus pneumoniae Cp1015	41.304	97.046	0.401
vicR	Streptococcus mutans UA159	39.056	98.312	0.384