Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   NYE20_RS17300 Genome accession   NZ_CP150252
Coordinates   3233653..3235971 (-) Length   772 a.a.
NCBI ID   WP_161621287.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0416     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3228653..3240971
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE20_RS17260 (NYE20_17260) - 3229120..3229551 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  NYE20_RS17265 (NYE20_17265) - 3229551..3229892 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  NYE20_RS17270 (NYE20_17270) - 3229885..3231366 (+) 1482 WP_043940184.1 Na+/H+ antiporter subunit D -
  NYE20_RS17275 (NYE20_17275) - 3231372..3231848 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  NYE20_RS17280 (NYE20_17280) - 3231848..3232132 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  NYE20_RS17285 (NYE20_17285) mnhG 3232116..3232490 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  NYE20_RS17290 (NYE20_17290) - 3232529..3232909 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  NYE20_RS17295 (NYE20_17295) comA 3232928..3233572 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  NYE20_RS17300 (NYE20_17300) comP 3233653..3235971 (-) 2319 WP_161621287.1 sensor histidine kinase Regulator
  NYE20_RS17305 (NYE20_17305) comX 3235991..3236167 (-) 177 WP_041906074.1 competence pheromone ComX -
  NYE20_RS17310 (NYE20_17310) - 3236182..3237039 (-) 858 WP_309248341.1 polyprenyl synthetase family protein -
  NYE20_RS17315 (NYE20_17315) degQ 3237207..3237347 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  NYE20_RS17320 (NYE20_17320) - 3237569..3237694 (+) 126 WP_161621781.1 hypothetical protein -
  NYE20_RS17325 (NYE20_17325) - 3237810..3238178 (+) 369 WP_017695529.1 hypothetical protein -
  NYE20_RS17330 (NYE20_17330) pdeH 3238154..3239383 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 772 a.a.        Molecular weight: 90001.35 Da        Isoelectric Point: 8.6883

>NTDB_id=967904 NYE20_RS17300 WP_161621287.1 3233653..3235971(-) (comP) [Bacillus sp. FSL R5-0416]
MKNLKRNFSIVLVLFSLLYFAYIVYFTQNGILVGTYVSETANHELKVEKMTKATYGKYMGLKEGDLILEVSGKKPTSENV
KRNYLAKAEHLKVKRDNHEIQLHNTEYISLNNSYSFFIYIIPCIFFALSLLCAFYIYRVNRVKNTYSAYILINFLLFISI
AYLSAGGVTRGYEINRYINLFTFLNVPVLYLHFLYQYFKELSIKFSSRYIVNILYTLPIINVIIEFIQKYLPSGIITNIS
NINLVTFLIEITVVYFCIIYYGIIYRKKDHYYLLKVLLISNTVAFFPFTVLYIMPEVLFGQYIYSAIVTAPFLIIIPLAL
VYQFVVNKIYDIDFILGRIRYYSLLSIIPTIGIVWLSIIFDSKRADFNIILITLCTFIIFLSVFYIKELLDYKFRLKRFS
EKYNYQDSIFKYTQLIKGVSALDQVFKNLKTTILEVLPVSKAYIFEVGADREIIYFDKQSVEPNWRLYKTEFEKVTKEIG
KIIEINQGFLIKVGEKGTSSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENVVQIEELMDHLQALKREGANPVWLK
KLMYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQL
LYDLGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYE
DDGVGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2319 bp        

>NTDB_id=967904 NYE20_RS17300 WP_161621287.1 3233653..3235971(-) (comP) [Bacillus sp. FSL R5-0416]
TTGAAAAACCTTAAAAGAAATTTTTCTATAGTGCTAGTATTATTTAGTCTCTTATATTTTGCTTATATTGTTTATTTCAC
TCAGAATGGTATCTTAGTTGGTACTTATGTTTCTGAAACAGCCAATCATGAGTTAAAAGTTGAAAAAATGACTAAAGCCA
CATATGGAAAATATATGGGCTTAAAAGAAGGCGACTTAATACTCGAGGTAAGTGGGAAGAAACCTACAAGCGAGAATGTT
AAAAGAAATTATTTAGCAAAAGCTGAACATTTAAAAGTTAAAAGGGATAATCATGAAATTCAATTACATAATACGGAGTA
TATCTCTTTAAATAATTCTTATAGCTTTTTCATTTATATTATCCCTTGTATATTTTTTGCTTTGAGTCTGTTATGTGCAT
TTTATATTTATAGGGTCAATCGAGTAAAAAATACGTACTCGGCTTATATTTTGATTAATTTTTTGCTGTTTATATCTATA
GCATATTTAAGTGCTGGAGGCGTAACTAGAGGATATGAAATAAATAGATATATTAATCTTTTTACCTTTTTAAATGTACC
TGTCTTGTATTTGCATTTTCTATATCAATATTTCAAAGAATTAAGCATCAAATTTTCATCACGTTATATCGTGAATATTT
TATACACGTTGCCAATTATCAATGTAATAATAGAGTTCATCCAGAAATACCTTCCTTCGGGGATTATTACGAATATTAGT
AATATCAATTTAGTAACATTCTTAATAGAGATTACAGTTGTTTATTTTTGCATTATCTATTATGGGATAATTTATAGAAA
AAAGGATCATTATTATTTGTTGAAGGTATTATTGATTTCAAATACGGTAGCTTTCTTTCCTTTTACGGTCTTATATATCA
TGCCGGAAGTTTTATTTGGGCAATATATTTACTCAGCAATAGTGACTGCGCCATTCTTAATAATTATCCCATTAGCATTG
GTTTATCAATTCGTTGTAAATAAAATTTATGATATAGACTTTATACTAGGCAGAATTAGATATTATAGTTTATTATCCAT
CATACCAACAATAGGCATAGTATGGTTGTCAATAATATTTGATAGCAAAAGAGCGGATTTTAATATCATCTTAATTACGT
TATGTACTTTCATAATTTTCCTGTCGGTCTTTTATATTAAAGAATTACTGGACTATAAATTTCGGTTAAAACGATTTTCG
GAAAAATATAATTATCAAGACAGTATATTTAAATATACGCAATTAATTAAAGGTGTATCAGCTTTAGATCAAGTATTTAA
GAACTTAAAAACAACAATACTAGAAGTTCTACCCGTAAGTAAAGCCTACATCTTTGAAGTTGGTGCTGATAGAGAAATCA
TATACTTTGATAAACAGAGTGTTGAACCCAACTGGAGGCTGTATAAAACAGAATTTGAAAAGGTCACTAAAGAAATAGGG
AAGATTATTGAGATTAACCAAGGCTTTTTGATCAAAGTAGGGGAAAAAGGTACGAGTTCTTATGTATTGCTTTGTTTATC
TAGCATCAATACACCAAGGTTGACAAGAGATGAAATTTCATGGCTGAAAACATTATCGTTTTATACTAGTGTATCCATGG
AAAATGTTGTACAAATTGAAGAACTCATGGATCATTTACAAGCTTTAAAAAGGGAAGGTGCCAACCCCGTATGGCTCAAA
AAACTCATGTACACGATCGAGGAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGAT
TTCCTTAAAACGCCAGTGTGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACA
AGCTTGTACAGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTT
CTGTATGATCTTGGATTGGTGAAGGCGTTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTT
AAATACCGGCAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTATACCGGATCATTCAAGAGTTTCTGTCTA
ATGCGGTTAAGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATTAGTATTCAAAACAAAATCGTTCTTCATTATGAG
GACGATGGCGTTGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGT
CAGGGCTTTAGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

64.424

100

0.645


Multiple sequence alignment