Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NYE20_RS13570 | Genome accession | NZ_CP150252 |
| Coordinates | 2557256..2558326 (-) | Length | 356 a.a. |
| NCBI ID | WP_032726161.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL R5-0416 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2552256..2563326
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYE20_RS13525 (NYE20_13525) | tapA | 2552735..2553496 (-) | 762 | WP_032726156.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NYE20_RS13530 (NYE20_13530) | - | 2553767..2554093 (+) | 327 | WP_038829733.1 | YqzG/YhdC family protein | - |
| NYE20_RS13535 (NYE20_13535) | - | 2554135..2554314 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| NYE20_RS13540 (NYE20_13540) | comGG | 2554386..2554760 (-) | 375 | WP_032726157.1 | ComG operon protein ComGG | Machinery gene |
| NYE20_RS13545 (NYE20_13545) | comGF | 2554761..2555144 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| NYE20_RS13550 (NYE20_13550) | comGE | 2555170..2555517 (-) | 348 | WP_063335293.1 | ComG operon protein 5 | Machinery gene |
| NYE20_RS13555 (NYE20_13555) | comGD | 2555501..2555932 (-) | 432 | WP_032726159.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| NYE20_RS13560 (NYE20_13560) | comGC | 2555922..2556218 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| NYE20_RS13565 (NYE20_13565) | comGB | 2556232..2557269 (-) | 1038 | WP_086344083.1 | comG operon protein ComGB | Machinery gene |
| NYE20_RS13570 (NYE20_13570) | comGA | 2557256..2558326 (-) | 1071 | WP_032726161.1 | competence protein ComGA | Machinery gene |
| NYE20_RS13575 (NYE20_13575) | - | 2558538..2558735 (-) | 198 | WP_032726162.1 | hypothetical protein | - |
| NYE20_RS13580 (NYE20_13580) | corA | 2558737..2559690 (-) | 954 | WP_161621668.1 | magnesium transporter CorA | - |
| NYE20_RS13585 (NYE20_13585) | - | 2559833..2561161 (+) | 1329 | WP_021480026.1 | hemolysin family protein | - |
| NYE20_RS13590 (NYE20_13590) | rsbRD | 2561214..2562050 (-) | 837 | WP_141949677.1 | RsbT co-antagonist protein RsbRD | - |
| NYE20_RS13600 (NYE20_13600) | mgsR | 2562274..2562654 (-) | 381 | WP_003230147.1 | transcriptional regulator MgsR | - |
| NYE20_RS13605 (NYE20_13605) | - | 2562886..2563131 (+) | 246 | WP_003226300.1 | DUF2626 domain-containing protein | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40431.62 Da Isoelectric Point: 9.0175
>NTDB_id=967889 NYE20_RS13570 WP_032726161.1 2557256..2558326(-) (comGA) [Bacillus sp. FSL R5-0416]
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQSGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQSGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
Nucleotide
Download Length: 1071 bp
>NTDB_id=967889 NYE20_RS13570 WP_032726161.1 2557256..2558326(-) (comGA) [Bacillus sp. FSL R5-0416]
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAGCGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAGGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCTGCAGGTCTGAAAGCAATTTTGCGCCATGATCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCCATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAGCGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAGGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCTGCAGGTCTGAAAGCAATTTTGCGCCATGATCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCCATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
99.719 |
100 |
0.997 |