Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | NYE20_RS13565 | Genome accession | NZ_CP150252 |
| Coordinates | 2556232..2557269 (-) | Length | 345 a.a. |
| NCBI ID | WP_086344083.1 | Uniprot ID | - |
| Organism | Bacillus sp. FSL R5-0416 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2551232..2562269
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NYE20_RS13515 (NYE20_13515) | tasA | 2551329..2552114 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| NYE20_RS13520 (NYE20_13520) | - | 2552179..2552751 (-) | 573 | WP_003246088.1 | signal peptidase I | - |
| NYE20_RS13525 (NYE20_13525) | tapA | 2552735..2553496 (-) | 762 | WP_032726156.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NYE20_RS13530 (NYE20_13530) | - | 2553767..2554093 (+) | 327 | WP_038829733.1 | YqzG/YhdC family protein | - |
| NYE20_RS13535 (NYE20_13535) | - | 2554135..2554314 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| NYE20_RS13540 (NYE20_13540) | comGG | 2554386..2554760 (-) | 375 | WP_032726157.1 | ComG operon protein ComGG | Machinery gene |
| NYE20_RS13545 (NYE20_13545) | comGF | 2554761..2555144 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| NYE20_RS13550 (NYE20_13550) | comGE | 2555170..2555517 (-) | 348 | WP_063335293.1 | ComG operon protein 5 | Machinery gene |
| NYE20_RS13555 (NYE20_13555) | comGD | 2555501..2555932 (-) | 432 | WP_032726159.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| NYE20_RS13560 (NYE20_13560) | comGC | 2555922..2556218 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| NYE20_RS13565 (NYE20_13565) | comGB | 2556232..2557269 (-) | 1038 | WP_086344083.1 | comG operon protein ComGB | Machinery gene |
| NYE20_RS13570 (NYE20_13570) | comGA | 2557256..2558326 (-) | 1071 | WP_032726161.1 | competence protein ComGA | Machinery gene |
| NYE20_RS13575 (NYE20_13575) | - | 2558538..2558735 (-) | 198 | WP_032726162.1 | hypothetical protein | - |
| NYE20_RS13580 (NYE20_13580) | corA | 2558737..2559690 (-) | 954 | WP_161621668.1 | magnesium transporter CorA | - |
| NYE20_RS13585 (NYE20_13585) | - | 2559833..2561161 (+) | 1329 | WP_021480026.1 | hemolysin family protein | - |
| NYE20_RS13590 (NYE20_13590) | rsbRD | 2561214..2562050 (-) | 837 | WP_141949677.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39676.12 Da Isoelectric Point: 9.7153
>NTDB_id=967888 NYE20_RS13565 WP_086344083.1 2556232..2557269(-) (comGB) [Bacillus sp. FSL R5-0416]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=967888 NYE20_RS13565 WP_086344083.1 2556232..2557269(-) (comGB) [Bacillus sp. FSL R5-0416]
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |