Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NYE53_RS02185 Genome accession   NZ_CP150251
Coordinates   429203..430153 (+) Length   316 a.a.
NCBI ID   WP_088325307.1    Uniprot ID   -
Organism   Bacillus sp. FSL R5-0523     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 424203..435153
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE53_RS02160 (NYE53_02160) rapC 425664..426812 (+) 1149 WP_015252823.1 response regulator aspartate phosphatase RapC Regulator
  NYE53_RS02165 (NYE53_02165) phrC 426796..426918 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  NYE53_RS02170 (NYE53_02170) - 427018..427107 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  NYE53_RS02175 (NYE53_02175) - 427188..427301 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  NYE53_RS02180 (NYE53_02180) - 427454..428818 (-) 1365 WP_339247010.1 aspartate kinase -
  NYE53_RS02185 (NYE53_02185) ceuB 429203..430153 (+) 951 WP_088325307.1 petrobactin ABC transporter permease YclN Machinery gene
  NYE53_RS02190 (NYE53_02190) yclO 430146..431093 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  NYE53_RS02195 (NYE53_02195) yclP 431087..431845 (+) 759 WP_014475806.1 petrobactin ABC transporter ATP-binding protein YclP -
  NYE53_RS02200 (NYE53_02200) yclQ 431867..432820 (+) 954 WP_014478834.1 petrobactin ABC transporter substrate-binding protein YclQ -
  NYE53_RS02205 (NYE53_02205) - 432867..434285 (-) 1419 WP_014478836.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34885.30 Da        Isoelectric Point: 9.9364

>NTDB_id=967772 NYE53_RS02185 WP_088325307.1 429203..430153(+) (ceuB) [Bacillus sp. FSL R5-0523]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIIIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=967772 NYE53_RS02185 WP_088325307.1 429203..430153(+) (ceuB) [Bacillus sp. FSL R5-0523]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTATCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTAGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTCTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTGATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TGAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTTATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment