Detailed information NTG0967214

Bioinformatically predicted

Overview

• Name: scnR
• Type: Regulator
• Locus tag: MKX33_RS08745
• Genome accession: NZ_CP150236
• Coordinates: 1911204..1911917 (-)
• Length: 237 a.a.
• NCBI ID: WP_339190160.1
• Uniprot ID: -
• Organism: Paenibacillus sp. FSL R5-0490
• Function: regulate comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 1906204..1916917

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MKX33_RS08735 (MKX33_08735)	-	1909363..1909545 (-)	183	WP_339190157.1	type A2 lanthipeptide	-
MKX33_RS08740 (MKX33_08740)	-	1909822..1911204 (-)	1383	WP_339190159.1	HAMP domain-containing sensor histidine kinase	-
MKX33_RS08745 (MKX33_08745)	scnR	1911204..1911917 (-)	714	WP_339190160.1	response regulator transcription factor	Regulator
MKX33_RS08750 (MKX33_08750)	-	1912074..1912991 (+)	918	WP_339191428.1	ABC transporter ATP-binding protein	-
MKX33_RS08755 (MKX33_08755)	-	1912991..1913740 (+)	750	WP_036673138.1	ABC transporter permease	-
MKX33_RS08760 (MKX33_08760)	-	1913753..1914484 (+)	732	WP_036673135.1	ABC transporter permease	-
MKX33_RS08765 (MKX33_08765)	-	1914514..1914867 (+)	354	WP_036616662.1	YxeA family protein	-
MKX33_RS08770 (MKX33_08770)	-	1914953..1916209 (-)	1257	WP_339190162.1	DUF445 domain-containing protein	-

Sequence

Protein

• Length: 237 a.a.
• Molecular weight: 27078.45 Da
• Isoelectric Point: 4.8542

>NTDB_id=967214 MKX33_RS08745 WP_339190160.1 1911204..1911917(-) (scnR) [Paenibacillus sp. FSL R5-0490]
MELLKNKKILIVDDEPEIREMIERFLRKEGFFRVYTADNFVNALAVCRLEKPDAAILDVMLPDGDGFSLLSSIRSFSDMP
VLFLSARGEDEDRLLGLGLGADDYMVKPFLPRELILRLMAILKRVYASNTVERLPVFRLGEQTIDLESAVVQGTDRELPL
TAKEHSILIKLYENQGRIVTSDALCQAVWGDESYGYENTLMVHVRRIREKIEEDPSKPIFLLTVRGLGYKLMAQEPR

Nucleotide

• Length: 714 bp

>NTDB_id=967214 MKX33_RS08745 WP_339190160.1 1911204..1911917(-) (scnR) [Paenibacillus sp. FSL R5-0490]
ATGGAATTATTGAAGAATAAGAAAATATTGATCGTAGATGATGAGCCCGAAATACGGGAAATGATTGAACGTTTTTTACG
GAAAGAAGGTTTTTTTCGGGTCTATACGGCCGATAACTTCGTGAATGCCTTGGCAGTATGCAGGCTTGAAAAACCGGATG
CAGCAATCCTGGACGTGATGCTTCCAGATGGGGATGGGTTCTCTCTGCTCTCTTCGATCCGGTCATTCTCGGACATGCCT
GTTCTGTTCCTGTCGGCACGTGGTGAAGATGAGGATCGATTGCTCGGTCTGGGGCTGGGAGCGGATGATTATATGGTCAA
GCCCTTTCTGCCAAGAGAGTTGATTCTCAGGCTGATGGCTATTCTGAAGCGGGTATATGCCTCCAATACGGTGGAGAGAT
TGCCTGTATTCCGTTTAGGTGAACAAACCATTGATCTGGAGAGTGCTGTTGTACAGGGGACAGACAGGGAGCTTCCATTG
ACAGCTAAGGAGCATTCCATACTGATCAAGTTGTATGAGAATCAAGGCCGGATTGTAACCAGTGATGCCCTGTGTCAAGC
CGTATGGGGAGACGAGAGTTATGGTTATGAAAATACACTGATGGTGCATGTTCGGCGAATCCGGGAGAAGATTGAGGAAG
ACCCATCCAAACCGATATTTTTGCTAACCGTTCGGGGACTTGGTTACAAACTGATGGCTCAGGAGCCTAGGTGA

Domains

Predicted by InterproScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (156-231)

• Response regulator receiver domain (Response_reg) (9-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
scnR	Streptococcus mutans UA159	50.661	95.781	0.485
micA	Streptococcus pneumoniae Cp1015	41.304	97.046	0.401
vicR	Streptococcus mutans UA159	39.056	98.312	0.384