Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACKWPP_RS03555 Genome accession   NZ_CP176418
Coordinates   654321..655004 (+) Length   227 a.a.
NCBI ID   WP_012027525.1    Uniprot ID   A0A0H3MWH7
Organism   Streptococcus suis strain KKAHC02     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 649321..660004
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKWPP_RS03540 (ACKWPP_03540) - 650225..651349 (+) 1125 WP_105120008.1 aminotransferase -
  ACKWPP_RS03545 (ACKWPP_03545) - 651477..653058 (+) 1582 Protein_650 IS1182 family transposase -
  ACKWPP_RS03550 (ACKWPP_03550) - 652970..654151 (-) 1182 WP_105120359.1 DUF2974 domain-containing protein -
  ACKWPP_RS03555 (ACKWPP_03555) braR 654321..655004 (+) 684 WP_012027525.1 response regulator transcription factor Regulator
  ACKWPP_RS03560 (ACKWPP_03560) - 654997..655989 (+) 993 WP_044762467.1 HAMP domain-containing sensor histidine kinase -
  ACKWPP_RS03565 (ACKWPP_03565) - 656085..656843 (+) 759 WP_024418785.1 ABC transporter ATP-binding protein -
  ACKWPP_RS03570 (ACKWPP_03570) - 656845..658845 (+) 2001 WP_044762466.1 ABC transporter permease -
  ACKWPP_RS03575 (ACKWPP_03575) - 659213..659377 (+) 165 WP_024386445.1 membrane protein -
  ACKWPP_RS03580 (ACKWPP_03580) - 659374..659709 (+) 336 WP_014736185.1 PadR family transcriptional regulator -

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 26581.80 Da        Isoelectric Point: 4.5525

>NTDB_id=966838 ACKWPP_RS03555 WP_012027525.1 654321..655004(+) (braR) [Streptococcus suis strain KKAHC02]
MQKILLIEDDKTISQLVAKNLINWGYQVQEVKDFQMVLEQMEEFQPHLILLDIGLPFFNGYYWCQEIRKTSRVPIMFLSS
HDQPMDIVMAINMGADDYVTKPFEMTVLLAKIQGLLRRTYDFVGEQSLLWFEEISLDLKTMQVSYGQVVEELTRNEFQIL
RVLFEHGKEVVSREELMRELWNSDIFVDDNTLSVNIARLRKKLAELDLPDVIATKKGVGYGLVWTHE

Nucleotide


Download         Length: 684 bp        

>NTDB_id=966838 ACKWPP_RS03555 WP_012027525.1 654321..655004(+) (braR) [Streptococcus suis strain KKAHC02]
ATGCAGAAAATTCTTCTTATCGAGGATGATAAAACGATTAGCCAACTAGTTGCTAAAAACTTGATAAACTGGGGTTACCA
GGTGCAAGAGGTCAAGGATTTTCAGATGGTTTTGGAACAGATGGAAGAGTTTCAGCCCCATTTGATTTTACTGGATATTG
GCCTGCCTTTTTTCAATGGCTATTACTGGTGTCAGGAAATTCGCAAGACCTCCCGTGTGCCCATTATGTTTCTGTCTTCC
CATGACCAGCCAATGGATATTGTTATGGCGATCAATATGGGGGCGGATGACTATGTGACCAAGCCCTTTGAAATGACGGT
TCTCCTGGCCAAAATACAGGGGCTTCTTAGAAGAACCTATGACTTTGTCGGCGAACAAAGTTTGCTCTGGTTTGAGGAGA
TTTCTCTAGACTTAAAGACCATGCAGGTGTCCTATGGACAGGTTGTGGAAGAACTGACGCGAAATGAATTTCAGATTTTA
CGCGTTTTATTTGAACATGGCAAGGAAGTGGTCAGCCGCGAGGAGCTGATGAGAGAACTCTGGAATAGTGATATTTTTGT
GGATGACAATACTTTATCGGTTAACATCGCTCGCCTGCGTAAGAAATTGGCAGAACTGGATCTGCCAGATGTGATTGCGA
CCAAGAAAGGAGTAGGCTACGGCCTGGTGTGGACACATGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MWH7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.706

96.035

0.458
  vicR Streptococcus mutans UA159

39.13

100

0.396
  micA Streptococcus pneumoniae Cp1015

37.991

100

0.383