Detailed information
Bioinformatically predicted
Overview
| Name | scnR | Type | Regulator |
| Locus tag | ACKWPP_RS03190 | Genome accession | NZ_CP176418 |
| Coordinates | 580489..581133 (+) | Length | 214 a.a. |
| NCBI ID | WP_024385031.1 | Uniprot ID | - |
| Organism | Streptococcus suis strain KKAHC02 | ||
| Function | regulate comX expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 575489..586133
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACKWPP_RS03175 (ACKWPP_03175) | - | 576691..577290 (+) | 600 | WP_409374382.1 | M13-type metalloendopeptidase | - |
| ACKWPP_RS03180 (ACKWPP_03180) | - | 577425..578834 (+) | 1410 | WP_409374170.1 | collagen binding domain-containing protein | - |
| ACKWPP_RS03185 (ACKWPP_03185) | - | 579616..580323 (-) | 708 | WP_409374171.1 | CPBP family intramembrane glutamic endopeptidase | - |
| ACKWPP_RS03190 (ACKWPP_03190) | scnR | 580489..581133 (+) | 645 | WP_024385031.1 | response regulator transcription factor | Regulator |
| ACKWPP_RS03195 (ACKWPP_03195) | - | 581136..582494 (+) | 1359 | WP_409374172.1 | ATP-binding protein | - |
| ACKWPP_RS03200 (ACKWPP_03200) | - | 582776..583321 (+) | 546 | WP_044684217.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 24564.67 Da Isoelectric Point: 4.8919
>NTDB_id=966834 ACKWPP_RS03190 WP_024385031.1 580489..581133(+) (scnR) [Streptococcus suis strain KKAHC02]
MAKIMVVEDDIVISQVVCEFLKDHGYEVTHISDGKIALETFREESFDLIVLDIMIPSMTGLEVLQEIRKTSKIPILMLTA
MDDEYTQLVSFNQLISDYVVKPFSPIILVKRIENILRGEGDIIEAADIQIHPSSGAVYMAEEEVQLTKKEYEILLYLAKR
RGKIVNRDHLMLGIWGYTELDSRVLDNHIKNLRKKLPSLPLRTVIGRGYQVEEF
MAKIMVVEDDIVISQVVCEFLKDHGYEVTHISDGKIALETFREESFDLIVLDIMIPSMTGLEVLQEIRKTSKIPILMLTA
MDDEYTQLVSFNQLISDYVVKPFSPIILVKRIENILRGEGDIIEAADIQIHPSSGAVYMAEEEVQLTKKEYEILLYLAKR
RGKIVNRDHLMLGIWGYTELDSRVLDNHIKNLRKKLPSLPLRTVIGRGYQVEEF
Nucleotide
Download Length: 645 bp
>NTDB_id=966834 ACKWPP_RS03190 WP_024385031.1 580489..581133(+) (scnR) [Streptococcus suis strain KKAHC02]
ATGGCGAAAATTATGGTTGTAGAAGATGATATTGTTATCAGTCAAGTAGTTTGTGAGTTTCTAAAGGATCACGGCTATGA
AGTGACCCATATTTCCGACGGAAAAATTGCACTTGAAACATTTCGAGAAGAATCATTTGATTTGATTGTATTGGACATTA
TGATTCCGTCCATGACAGGATTGGAAGTCCTACAGGAGATTCGTAAGACATCAAAAATTCCAATTCTTATGTTAACGGCA
ATGGATGACGAATACACTCAATTGGTTAGCTTCAATCAACTGATTAGTGACTACGTTGTAAAACCTTTTTCGCCGATTAT
TCTTGTGAAACGCATTGAAAATATTTTGCGTGGTGAAGGTGATATTATAGAAGCAGCCGACATCCAAATCCATCCGTCCA
GTGGAGCGGTTTATATGGCAGAAGAAGAAGTGCAATTAACGAAAAAAGAATACGAGATTTTACTGTACTTGGCAAAACGA
CGTGGAAAAATTGTCAATCGTGATCATCTAATGCTGGGAATTTGGGGCTATACAGAACTGGATAGCCGAGTTTTGGACAA
TCATATCAAGAATCTACGTAAGAAGTTACCATCTCTTCCTTTACGAACGGTAATTGGTCGAGGTTATCAGGTTGAGGAAT
TCTAA
ATGGCGAAAATTATGGTTGTAGAAGATGATATTGTTATCAGTCAAGTAGTTTGTGAGTTTCTAAAGGATCACGGCTATGA
AGTGACCCATATTTCCGACGGAAAAATTGCACTTGAAACATTTCGAGAAGAATCATTTGATTTGATTGTATTGGACATTA
TGATTCCGTCCATGACAGGATTGGAAGTCCTACAGGAGATTCGTAAGACATCAAAAATTCCAATTCTTATGTTAACGGCA
ATGGATGACGAATACACTCAATTGGTTAGCTTCAATCAACTGATTAGTGACTACGTTGTAAAACCTTTTTCGCCGATTAT
TCTTGTGAAACGCATTGAAAATATTTTGCGTGGTGAAGGTGATATTATAGAAGCAGCCGACATCCAAATCCATCCGTCCA
GTGGAGCGGTTTATATGGCAGAAGAAGAAGTGCAATTAACGAAAAAAGAATACGAGATTTTACTGTACTTGGCAAAACGA
CGTGGAAAAATTGTCAATCGTGATCATCTAATGCTGGGAATTTGGGGCTATACAGAACTGGATAGCCGAGTTTTGGACAA
TCATATCAAGAATCTACGTAAGAAGTTACCATCTCTTCCTTTACGAACGGTAATTGGTCGAGGTTATCAGGTTGAGGAAT
TCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| scnR | Streptococcus mutans UA159 |
38.739 |
100 |
0.402 |
| micA | Streptococcus pneumoniae Cp1015 |
37.281 |
100 |
0.397 |
| vicR | Streptococcus mutans UA159 |
35.47 |
100 |
0.388 |